CX296636

Overview
NameCX296636
Unique NameCX296636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALRB_DICDI (Aldose reductase B OS=Dictyostelium discoideum GN=alrB PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 4.156e-22
Identity = 65/155 (41.94%), Postives = 86/155 (55.48%), Query Frame = 2
Query:  140 FELNNGAK-MPPIGLGTWQ-AQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFIS------LNPED----LLQPDIPSTWKAMEALYDSG 568
            F+LN+    +P IGLGT+  A+ G V          GYRHID A  Y NEKEIG  LK++F +G IKRED++  SKLW   H    V K  ++TL+DL ++Y+DLYL+HWP+  +    S      L   D    L    I  TW+ ME L + G
Sbjct:    8 FKLNDDIHHIPMIGLGTYNGAKVGEVGDAVKVALKSGYRHIDGAAIYMNEKEIGHALKEVFAEGEIKREDIFYVSKLWNSCHHASLVRKHCEKTLEDLGLEYLDLYLIHWPIAFENADPSGTTTQPLRDSDGEPVLAAVSIRETWQEMEKLVEYG 162          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: GRE3_YEAST (NADPH-dependent aldose reductase GRE3 OS=Saccharomyces cerevisiae GN=GRE3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.089e-22
Identity = 47/111 (42.34%), Postives = 68/111 (61.26%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK 478
            LNNG KMP +GLG W+    V           GYR  D A  YGNEKE+G  ++K   +G++ R+D+++ SKLW   H P+ V  A+ +TL D+ +DY+DLY +H+P+  K
Sbjct:    7 LNNGLKMPLVGLGCWKIDKKVCANQIYEAIKLGYRLFDGACDYGNEKEVGEGIRKAISEGLVSRKDIFVVSKLWNNFHHPDHVKLALKKTLSDMGLDYLDLYYIHFPIAFK 117          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.002e-21
Identity = 59/154 (38.31%), Postives = 77/154 (50.00%), Query Frame = 2
Query:  143 ELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWP---------VRTKKGFISLNPEDL---LQPDIPSTWKAMEALYDSG 568
            +LN+G  MP +G G W+  + V           GYR  D A  YGNEKE G  + +  +DG++KREDL+I SKLW   H  + V     R L D QIDY DL+LVH+P         VR   G+      ++       +  TW AME L D G
Sbjct:    7 KLNSGYDMPQVGFGLWKVDNAVCADTVYNAIKAGYRLFDGACDYGNEKECGEGVARAIKDGLVKREDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYFDLFLVHFPAALEYVDPSVRYPPGWFYDGKSEVRWSKTTTLQQTWGAMERLVDKG 160          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1D1_MOUSE (3-oxo-5-beta-steroid 4-dehydrogenase OS=Mus musculus GN=Akr1d1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.337e-20
Identity = 54/150 (36.00%), Postives = 85/150 (56.67%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQH---GVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSG 568
            L++G  +P IGLGT+       G            GYRHID AY Y NE E+G  +++   +G +KRE+++   KLW  +H P  V  A++RTL+ L++DY+DLY++  P+  K G   + P D        + ++ +TW+A+EA  D+G
Sbjct:   12 LSDGNNIPLIGLGTYSDPRPVPGKTYVAVKTAIDEGYRHIDGAYVYHNEHEVGEAIREKIAEGKVKREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYIIELPMAFKPG-KEIYPRDENGRIIYDKTNLCATWEALEACKDAG 160          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.746e-20
Identity = 45/105 (42.86%), Postives = 71/105 (67.62%), Query Frame = 2
Query:  242 GYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFIS--LNPEDLLQPDIPSTWKAME 550
            GYRH D A  YG+E+ +G  LK+    G++ R+DL++TSKLW  ++ P  V  A+ ++L+ LQ++Y+DLYL+HWP+ ++ G  S  +  EDLL  D+   W++ME
Sbjct:   49 GYRHFDTAAAYGSEQALGEALKEAIHLGLVSRQDLFVTSKLWVTENHPHLVLPALRKSLKTLQLEYLDLYLIHWPLSSQPGKFSFPIEVEDLLPFDVKGVWESME 153          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: YTBE_BACSU (Uncharacterized oxidoreductase ytbE OS=Bacillus subtilis GN=ytbE PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.281e-20
Identity = 54/142 (38.03%), Postives = 74/142 (52.11%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGV-VXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSG 568
            L+NG +MP  GLG +Q + G  +          GYR ID A  YGNE  +G  +++  E+  I REDL+ITSK+W  D   E+   A + +L  L +DY+DLYL+HWPV  K                   W+A+E LY  G
Sbjct:   11 LHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEGK---------------YKEAWRALETLYKEG 137          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1D1_RABIT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagus cuniculus GN=AKR1D1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.636e-20
Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQ----AQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSG 568
            L +G  +P IGLGT+        G            GYRHID AY Y NE E+G   ++   +G ++RED++   KLW  +H P  V   ++RTL+ L++DY+DLY++  P+  K G + + P D        + ++ +TW+A+EA  D+G
Sbjct:   12 LGDGNSIPIIGLGTYSEPKTTPKGSCATSVKIAIDTGYRHIDGAYIYQNEHEVGETFREKIAEGKVRREDIFYCGKLWATNHDPVMVRPTLERTLKVLKLDYIDLYIIEIPMAFKPGDV-VYPRDENGKWLYHKTNLCATWEALEACKDAG 161          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 8.666e-20
Identity = 51/149 (34.23%), Postives = 79/149 (53.02%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGT---WQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED-----LLQPDIPSTWKAMEALYDSG 568
            LN+G  +P +G GT    +                G+ H D A  Y  E  +G  ++    DG ++RED++ TSK+WC    PE V  +++R+LQ LQ DYVDLYL+H+P+  K G  +   ++       + D+ +TW+AME   D+G
Sbjct:   10 LNDGNFIPVLGFGTALPLECPKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPGEENFPVDEHGKLIFDRVDLCATWEAMEKCKDAG 158          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.521e-19
Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHG-VVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALY 559
            L+NG KMP  GLG WQ+  G V           GYRHID A  Y NE+ +G  L+       + RED++IT+KLW  +   E    A + + Q L +DY+DLYL+HWP    K  +S   +  L      +W+A E LY
Sbjct:   11 LSNGVKMPQFGLGVWQSPAGEVTENAVNWALCAGYRHIDTAAIYKNEESVGAGLRA----SGVPREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWP--RGKDILSKEGKKYL-----DSWRAFEQLY 138          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: XYL1_ASPNG (NAD(P)H-dependent D-xylose reductase OS=Aspergillus niger GN=xyrA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.582e-19
Identity = 56/150 (37.33%), Postives = 75/150 (50.00%), Query Frame = 2
Query:  143 ELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWP---------VRTKKGFISLNPE-DLLQPDIPSTWKAMEALYD 562
            +LN+G  MP +G G W+  +             GYR  D A  YGNE E G  + +  +DG++KRE+L+I SKLW   H  + V     + L D  IDY DLY+VH+P         VR   G+ S   E +     I  TW AME+L D
Sbjct:    7 KLNSGYDMPLVGFGLWKVNNDTCADQIYHAIKEGYRLFDGACDYGNEVEAGQGIARAIKDGLVKREELFIVSKLWNSFHDGDRVEPICRKQLADWGIDYFDLYIVHFPISLKYVDPAVRYPPGWKSEKDELEFGNATIQETWTAMESLVD 156          
The following BLAST results are available for this feature:
BLAST of CX296636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
ALRB_DICDI4.156e-2241.94Aldose reductase B OS=Dictyostelium discoideum GN=... [more]
GRE3_YEAST7.089e-2242.34NADPH-dependent aldose reductase GRE3 OS=Saccharom... [more]
XYL1_TRIRE6.002e-2138.31NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
AK1D1_MOUSE1.337e-2036.003-oxo-5-beta-steroid 4-dehydrogenase OS=Mus muscul... [more]
6DCS_SOYBN1.746e-2042.86NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
YTBE_BACSU2.281e-2038.03Uncharacterized oxidoreductase ytbE OS=Bacillus su... [more]
AK1D1_RABIT6.636e-2035.103-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagu... [more]
AK1CL_MOUSE8.666e-2034.23Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]
P100_LEIMA2.521e-1938.85Probable reductase OS=Leishmania major GN=P100/11E... [more]
XYL1_ASPNG9.582e-1937.33NAD(P)H-dependent D-xylose reductase OS=Aspergillu... [more]

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Properties
Property NameValue
Genbank descriptionC05801B03SK FerrChloL1 Citrus clementina cDNA clone C05801B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296636 ID=CX296636; Name=CX296636; organism=Citrus clementina; type=EST; length=568bp
GAGGAATTTCTGCCATCTCCCCGCAAATTCAATCTCATCTCTCCACAAAT
TAAAAGGCCAGTGATCACTCACTGCCCCTGGTCATTTCACACACATAACT
CGGGAAATGGACCAAATAGCAAACGATAACGTTCAATACTTCGAGTTGAA
CAATGGAGCCAAAATGCCGCCTATCGGATTAGGCACATGGCAGGCTCAAC
ATGGTGTTGTTGCCGAAGCCATTGCTATTGCCATCAAGGCTGGATACCGT
CATATCGATTGTGCTTATTTCTATGGCAATGAAAAGGAGATTGGTACCGA
GCTGAAGAAACTGTTTGAAGATGGAGTGATCAAGCGTGAGGATCTATGGA
TCACCTCCAAGCTCTGGTGTTGTGATCATGCACCAGAAGATGTACCAAAG
GCAATGGACAGAACTTTGCAGGACTTGCAGATTGATTACGTGGATTTGTA
CCTCGTGCACTGGCCAGTGCGAACGAAGAAGGGATTTATAAGCCTCAATC
CCGAAGACCTTCTTCAACCAGATATACCAAGCACATGGAAAGCAATGGAG
GCACTTTATGATTCTGGC
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