CX296637

Overview
NameCX296637
Unique NameCX296637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296637 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.496e-59
Identity = 107/199 (53.77%), Postives = 137/199 (68.84%), Query Frame = 1
Query:   91 FPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQ--TEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHG-ANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 678
            FPVI++E + G ER A +E++++ACENWGFFE++NHGI  E MD VE++TK HY++  EQRF E  +    EG     +   +DWESTF+VRHLP+S I ++PDLD++YR++M                          GYL K F G A  PTFGTKVS+YPPCP+PDL++GLRAHTDAGGIILLFQDD+V GLQLLK
Sbjct:    7 FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLK 205          

HSP 2 Score: 24.6386 bits (52), Expect = 2.496e-59
Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 3
Query:  678 DGQWIDVPP 704
            DG+W+DVPP
Sbjct:  206 DGEWVDVPP 214          
BLAST of CX296637 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 4.618e-58
Identity = 110/200 (55.00%), Postives = 139/200 (69.50%), Query Frame = 1
Query:   88 NFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQT-EVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 678
            +FPVI++E + G++R A +  + +ACENWG +EL+NHGI  E M+ VE + K HYR+  EQRFKE  AS+ L+ ++  E  ++DWESTF++RHLP S I+++PDLD++ R  M                          GYLKKVF G +   PTFGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDDKVSGLQLLK
Sbjct:    5 SFPVINMELLQGSQRPAAMALLRDACENWGLYELLNHGISHELMNRVETVNKEHYRRFREQRFKEF-ASKTLDTVENVEPENLDWESTFFLRHLPTSNISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLK 203          

HSP 2 Score: 25.0238 bits (53), Expect = 4.618e-58
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 3
Query:  678 DGQWIDVPP 704
            DG+WIDVPP
Sbjct:  204 DGEWIDVPP 212          
BLAST of CX296637 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.023e-57
Identity = 111/200 (55.50%), Postives = 141/200 (70.50%), Query Frame = 1
Query:   88 NFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQ-TEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 678
            +FPVI++E + G++R A +  + +ACENWGFFEL+NHGI  E M+ VE + K HYR+  EQRFKE  AS+ L+ ++  + +++DWESTF++RHLP S I+++PDLD++ R  M                          GYLK+VF G +   PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK
Sbjct:    5 SFPVINMELLQGSQRPAAMALLRDACENWGFFELLNHGISHELMNRVEAVNKEHYRRFREQRFKEF-ASKTLDSVENVDPDNLDWESTFFLRHLPTSNISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 203          

HSP 2 Score: 20.4014 bits (41), Expect = 1.023e-57
Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = 3
Query:  678 DGQWIDVPP 704
            D +WI+VPP
Sbjct:  204 DREWIEVPP 212          
BLAST of CX296637 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.125e-50
Identity = 102/197 (51.78%), Postives = 125/197 (63.45%), Query Frame = 1
Query:  106 LENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYR----KCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 678
            +E + G+ R+  +  + +ACENWGFFEL+NHGI  E  +  E + K HYR    +  EQRFKE  A     G   + +++DWESTF++RHLP S I++VPDLDE+    M                          GYLK+VF G +   PTFGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDD VSGLQLLK
Sbjct:    1 MELLEGSRRSDAMAVLRDACENWGFFELLNHGISHEPNEQSETVNKEHYREHYRRFREQRFKEFAAKTLDSGENVDGDNLDWESTFFLRHLPTSNISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLK 197          

HSP 2 Score: 21.9422 bits (45), Expect = 3.125e-50
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 3
Query:  678 DGQWIDVPP 704
            D +WIDVPP
Sbjct:  198 DEEWIDVPP 206          
BLAST of CX296637 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.590e-35
Identity = 81/202 (40.10%), Postives = 114/202 (56.44%), Query Frame = 1
Query:   94 PVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFK-----ELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHG--ANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 678
            PVI    ++G ERA  + +I   CE WGFF+LVNHGI  E ++ V++++   Y K  E+RF+     +L+ +   EG    ++++DWE  F ++       NE P    ++ + M                          G +KK F G   + P FGTKVS+YPPCP+ DL+KGLRAHTDAGG+ILLFQDD+V GLQ+LK
Sbjct:    4 PVIDFSKLDGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECY-KLREERFEGSKPVQLLDTLVKEGDGQRLDNVDWEDVFVLQD-----DNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLK 199          

HSP 2 Score: 21.557 bits (44), Expect = 3.590e-35
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 3
Query:  678 DGQWIDVPP 704
            DG+WIDV P
Sbjct:  200 DGRWIDVQP 208          
BLAST of CX296637 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 54/203 (26.60%), Postives = 96/203 (47.29%), Query Frame = 1
Query:   94 PVISLENI-NGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEG-----IQTEVNDMDWESTFY--VRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 678
            P+I ++ + +     + +EK++ AC+ WGFF+LVNHGI+  F+D V+   +  +   ME++ K       +EG     + +E   +DW   F+  V+ +     +  P L   +R  +                            L+K+F   +      +++ YPPCP+PD + GL  H+D+ G+ +L Q + V GLQ+ K
Sbjct:   54 PIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDS-VQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKK 255          
BLAST of CX296637 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 57/205 (27.80%), Postives = 87/205 (42.44%), Query Frame = 1
Query:   94 PVISLENI---NGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKEL--VASRALEGIQTEV-----NDMDWESTFYVRHLPQS--TINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQL 672
            P I L+ I   N   RA   EK+ +A  +WG   LVNHGI  E MD V +  KA +   +EQ+ K     AS  ++G  +++       ++WE  F+    P+    ++  P    +Y +                            G L+K   G        K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL
Sbjct:   52 PTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQL 255          
BLAST of CX296637 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 60/206 (29.13%), Postives = 95/206 (46.12%), Query Frame = 1
Query:   94 PVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVAS----RALEGIQTEVNDMDWESTFYVRHL-----PQSTINEV--PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 678
            PVI L + N  E   ++E I EA   WG F++VNHGI  + +  ++++ K  +   + Q+ KE++A     + +EG  T++         +V HL     P+S +N    P+    YR+                              LKK   G +   +  K++ YPPCP+PDL  G+ AHTD   I +L  ++ V GLQ+ K
Sbjct:   44 PVIDLGSSNNTEEN-LVELIAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFE--LPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKA-SGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPNE-VQGLQVHK 244          
BLAST of CX296637 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 58/206 (28.16%), Postives = 92/206 (44.66%), Query Frame = 1
Query:   94 PVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVA----SRALEGIQTEVNDMDWESTFYVRHL-----PQSTINEV--PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 678
            P I + +++  +  ++   + +A E WG F++VNHGI  E +  ++ + +  +   +    KE VA    S+ +EG  T++         +V HL     P S +N    P    EYR+V                             LK+   G     +  K++ YPPCP+PDL  G+ AHTD  GI LL  ++ V GLQ+ K
Sbjct:   41 PAIPVVDLSDPDEESVRRAVVKASEEWGLFQVVNHGIPTELIRRLQDVGRKFFE--LPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGL-GGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNE-VPGLQVFK 242          
BLAST of CX296637 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11
Identity = 52/206 (25.24%), Postives = 89/206 (43.20%), Query Frame = 1
Query:  100 ISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQR--FKELVASRALEGIQT----EVNDMD-----WESTFYVRHLPQSTINEV--PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 678
            + + + +  +   ++ +I EA  NWG +++VNH I  E +  ++ + K  +    E++  + +   S ++EG  T    E+++ D     W    + +  P S +N    P     YR+                              LKK   G N   +  K++ YPPCP+PDL  G+ AHTD   + +L  +D V GLQ  K
Sbjct:   41 VPIIDFSDPDEEKLIVQITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLFKEISEGDTTKKGWVDNLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDN-LEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVPND-VQGLQACK 244          
The following BLAST results are available for this feature:
BLAST of CX296637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
ACCO1_ORYSJ2.496e-5953.771-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_DORSP4.618e-5855.001-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO2_DORSP1.023e-5755.501-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO_DENCR3.125e-5051.781-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO_MUSAC3.590e-3540.101-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
SRG1_ARATH1.512e-1526.60Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
LDOX_MALDO7.025e-1327.80Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FLS_PETCR2.044e-1229.13Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FLS1_ARATH2.044e-1228.16Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FLS_MALDO6.575e-1125.24Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]

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Properties
Property NameValue
Genbank descriptionC05801B04SK FerrChloL1 Citrus clementina cDNA clone C05801B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296637 ID=CX296637; Name=CX296637; organism=Citrus clementina; type=EST; length=706bp
GAGGCCTCGTGCCGAATTCGGCACGAGGCACAACACAAACACTCACAAAC
ACACAGCTTGTTAAAGAAAGAATTCAGAGATATGGAGAACTTCCCCGTTA
TCAGCTTGGAGAACATCAATGGTGCTGAAAGAGCGGCTATCTTGGAGAAG
ATCAACGAGGCCTGTGAGAACTGGGGCTTCTTTGAGCTGGTGAATCATGG
AATTGAGCCGGAGTTTATGGACACAGTGGAGAGATTGACCAAGGCGCATT
ACAGAAAATGTATGGAGCAAAGATTCAAGGAGCTTGTTGCAAGCAGGGCA
CTTGAAGGTATCCAAACCGAGGTCAATGACATGGACTGGGAAAGCACTTT
CTATGTGCGTCACCTCCCTCAGTCGACCATCAATGAAGTCCCAGATCTTG
ATGAGGAATACAGGAAGGTGATGAAGGAATTTGCATTGAAATTGGAGAAA
TTAGCAGAGGAGCTATTGGACTTGTTATGCGAGAATCTTGGATTAGAGAA
GGGGTACTTGAAAAAGGTCTTTCATGGGGCAAACGGACCAACCTTTGGTA
CCAAAGTTAGCAACTACCCACCATGCCCCAAGCCAGATTTGATCAAGGGT
CTCCGGGCTCACACCGACGCCGGCGGCATCATCTTGCTCTTCCAGGATGA
CAAAGTCAGTGGCCTTCAGCTTCTTAAGATGGCCAGTGGATTGATGTGCC
CCCATT
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