CX296641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_PHOPR (L-threonine 3-dehydrogenase OS=Photobacterium profundum GN=tdh PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.125e-21 Identity = 57/159 (35.85%), Postives = 86/159 (54.09%), Query Frame = 1 Query: 235 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 P +G D+L+R+K ICG+DVH + + PMV+GHE G + +G EV+ GDRV+ E I+C C +C+GGR +LC G+ A +V PA FK+P +S + ++ +P +H ++ E +VLI GAGPIG+ Sbjct: 23 PEMGHNDLLIRIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFTIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNR-DGAFAEFLVIPAFNAFKIPAGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGI 179
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_FRAP2 (L-threonine 3-dehydrogenase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=tdh PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.125e-21 Identity = 56/160 (35.00%), Postives = 90/160 (56.25%), Query Frame = 1 Query: 232 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 +P G DVL+++K ICG+D+H + + + PM+ GHE AG + G+ V ++ GDRV+ E + C +C +C+ G+ +LC + V G+ A +V PA FK+PD++S + + +P+ +H N+ E +VLI GAGPIGL Sbjct: 21 MPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQATIPVPMITGHEFAGEVVAKGNGVTSVDVGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIGV-NVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGE-DVLITGAGPIGL 178
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_VIBSL (L-threonine 3-dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=tdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21 Identity = 57/161 (35.40%), Postives = 87/161 (54.04%), Query Frame = 1 Query: 229 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 E P +G D+L+R+K ICG+DVH + + PMV+GHE G + +G EV+ GDRV+ E I+C C +C+GGR +LC G+ + +V PA FK+P +S + ++ +P +H ++ E +VLI GAGPIG+ Sbjct: 21 EKPEMGHNDLLIRIKKTAICGTDVHIYNWDEWSQNTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNRT-GAFSEFLVIPAFNAFKIPAEISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGI 179
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_SHEWM (L-threonine 3-dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=tdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21 Identity = 55/159 (34.59%), Postives = 87/159 (54.72%), Query Frame = 1 Query: 235 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 P +G D+L++++ ICG+DVH + + PMV+GHE G + +G EV+ GDRV+ E I+C C +C+ GR +LC G+ A +V PA FK+PD++S + ++ +P +H ++ E +VLI GAGPIG+ Sbjct: 21 PEMGHNDLLIKIRKTAICGTDVHIYNWDEWSQNTIPVPMVVGHEYVGEVVDIGQEVRGFSIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-DGAFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_SHESH (L-threonine 3-dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=tdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21 Identity = 55/159 (34.59%), Postives = 88/159 (55.35%), Query Frame = 1 Query: 235 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 P +G D+L++++ ICG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C +C+GGR +LC G+ A +V PA FK+PD++S + ++ +P +H ++ E +VLI GAGPIG+ Sbjct: 21 PEMGHNDLLIKIRKTAICGTDIHIYNWDEWSQKTIPVPMVVGHEYVGEVIDMGIEVRGFDVGDRVSGEGHITCGHCRNCRGGRTHLCRNTSGVGVNR-DGAFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_MARMS (L-threonine 3-dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=tdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21 Identity = 58/158 (36.71%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 235 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIG 708 P G DV++++ ICG+D+H + A + PM +GHE GVI +VG EV GDRV+ E I+C C +C+ GR +LC + G+ A +V PA FK+P+N+S + A+ +P H ++ E +VLI GAGPIG Sbjct: 21 PDCGHNDVVIKISKTAICGTDMHIYQWDDWAQNTIPVPMTVGHEFVGVITEVGPEVSGFKIGDRVSGEGHITCGHCRNCRAGRRHLCRKTLGVGVNRT-GAFAEYLVIPASNAFKIPNNISDDMAAIFDPFGNATHTALSFDLIGE-DVLITGAGPIG 176
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_ALTMD (L-threonine 3-dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=tdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21 Identity = 56/165 (33.94%), Postives = 90/165 (54.55%), Query Frame = 1 Query: 217 IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 +Q P +G D+L++++ ICG+D+H + + P+V+GHE G + +G EVK GDRV+ E I+C C +C+ GR +LC + G+ A +V PA FK+PDN+S + ++ +P +H ++ E +VLI GAGPIG+ Sbjct: 15 LQDTPKPEVGHNDLLIKIRKTAICGTDMHIYNWDEWSQNTIPVPVVVGHEYVGEVVGMGQEVKGFEVGDRVSGEGHITCGHCRNCRAGRVHLCRNTEGVGVNR-PGAFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_XANOR (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=tdh PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21 Identity = 60/180 (33.33%), Postives = 90/180 (50.00%), Query Frame = 1 Query: 172 EVNMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 E N WL V +P+ GP +VL++++ ICG+D+H + +K + IGHE G + ++GS V G RV+ E I C C +C+GGR +LCP V+G+ A +V PA + +PD + E A +P H ++ E +VLI GAGPIG+ Sbjct: 8 ETNKGIWLEQV--------PVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTMGIGV-NVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_XANOM (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=tdh PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21 Identity = 60/180 (33.33%), Postives = 90/180 (50.00%), Query Frame = 1 Query: 172 EVNMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 E N WL V +P+ GP +VL++++ ICG+D+H + +K + IGHE G + ++GS V G RV+ E I C C +C+GGR +LCP V+G+ A +V PA + +PD + E A +P H ++ E +VLI GAGPIG+ Sbjct: 8 ETNKGIWLEQV--------PVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTMGIGV-NVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_VIBVY (L-threonine 3-dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=tdh PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21 Identity = 57/159 (35.85%), Postives = 86/159 (54.09%), Query Frame = 1 Query: 235 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 P LG D+L+++K ICG+DVH + + PMV+GHE G + +G EV+ GDRV+ E I+C C +C+GGR +LC G + +V PA FK+P N+S + ++ +P +H ++ E +VLI GAGPIG+ Sbjct: 23 PVLGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPANISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGI 179 The following BLAST results are available for this feature:
BLAST of CX296641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296641 ID=CX296641; Name=CX296641; organism=Citrus clementina; type=EST; length=711bpback to top |