CX296641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_PHOLL (L-threonine 3-dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=tdh PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22 Identity = 60/159 (37.74%), Postives = 87/159 (54.72%), Query Frame = 1 Query: 235 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 P LG DV+++++ ICG+DVH + + PMV+GHE G + +G EVK GDRV+ E I+C C +C+GGR +LC G A +V PA FK+PDN+S E A+ +P +H ++ E +VL+ GAGPIG+ Sbjct: 21 PELGHNDVMIKIRKTAICGTDVHIYNWDDWSQKTIPVPMVVGHEYVGEVVAIGQEVKGFKIGDRVSGEGHITCGYCRNCRGGRTHLCRNTIGVGVNRA-GCFAQYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_AERS4 (L-threonine 3-dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=tdh PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22 Identity = 62/160 (38.75%), Postives = 88/160 (55.00%), Query Frame = 1 Query: 235 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 P LG D+L++++ ICG+D+H A + PMV+GHE G + VG EV+ GDRV+ E I+C C +C+ GR +LC + P GS A +V PA FKLPDN+ E A+ +P +H ++ E +VLI GAGPIG+ Sbjct: 21 PELGHNDLLIKIRKTAICGTDMHIYNWDEWAQKTIPVPMVVGHEYVGEVVAVGQEVRGFAVGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRP--GSFAEYLVIPAFNAFKLPDNIPDELAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_PSEA6 (L-threonine 3-dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=tdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22 Identity = 56/161 (34.78%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 229 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 E+P++G D+L++++ ICG+D+H + + PMV+GHE G + ++G EV+ GDRV+ E I+C C +C+ GR +LC G+ A + PA FK+PDN+S + A+ +P +H ++ E +VLI GAGPIG+ Sbjct: 19 EMPTVGHNDILIKIRKTAICGTDMHIYNWDEWSQNTIPVPMVVGHEYVGEVVEIGEEVRGFAIGDRVSGEGHITCGHCRNCRAGRRHLCRNTSGVGVNRA-GAFAEYLSIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_ECOLI (L-threonine 3-dehydrogenase OS=Escherichia coli (strain K12) GN=tdh PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22 Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 232 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 +P LG D+L++++ ICG+DVH + + PMV+GHE G + +G EVK GDRV+ E I+C C +C+GGR +LC + P G A +V PA FK+PDN+S + A+ +P +H ++ E +VL+ GAGPIG+ Sbjct: 20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_ECODH (L-threonine 3-dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=tdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22 Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 232 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 +P LG D+L++++ ICG+DVH + + PMV+GHE G + +G EVK GDRV+ E I+C C +C+GGR +LC + P G A +V PA FK+PDN+S + A+ +P +H ++ E +VL+ GAGPIG+ Sbjct: 20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_ECOBW (L-threonine 3-dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=tdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22 Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 232 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 +P LG D+L++++ ICG+DVH + + PMV+GHE G + +G EVK GDRV+ E I+C C +C+GGR +LC + P G A +V PA FK+PDN+S + A+ +P +H ++ E +VL+ GAGPIG+ Sbjct: 20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_ECO24 (L-threonine 3-dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=tdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22 Identity = 59/161 (36.65%), Postives = 91/161 (56.52%), Query Frame = 1 Query: 232 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 +P LG D+L++++ ICG+DVH + + PMV+GHE G + +G EVK + GDRV+ E I+C C +C+GGR +LC + P G A +V PA FK+PDN+S + ++ +P +H ++ E +VL+ GAGPIG+ Sbjct: 20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFMIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGI 177
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: YJMD_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjmD OS=Bacillus subtilis GN=yjmD PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22 Identity = 63/156 (40.38%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 253 DVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 +VLV++K VGICGSD+H Y T A P VIGHE G +E VG+ V++L PGD V +EP C C C+ GR N+C ++ F VH G + +V P + ++ EE M EP ++G A R + VLI GAGPIG+ Sbjct: 27 EVLVKVKRVGICGSDMHIYHGTNPLATL----PRVIGHEVTGQVEAVGANVQSLKPGDHVVIEPISYCGSCYACRKGRPNVCAKLSVFG---VHEDGGMREYIVLPERQLHAVSKDLPWEEAVMAEPYTIGAQAVWRGQVEKGDTVLIQGAGPIGI 175
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_THET2 (L-threonine 3-dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=tdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22 Identity = 60/160 (37.50%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 232 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 +P GP ++LVR++A ICG+D+H K A ++ P+V GHE +GV+E VG VK GD V+LE + C C C+ G Y++C K G A VV PA+ + P ++ E A+ EP +H + +VLI GAGPIGL Sbjct: 20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVKRPQVGDHVSLESHVVCHACPACRTGNYHVCLNTKILGVDR-DGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGL 178
BLAST of CX296641 vs. ExPASy Swiss-Prot
Match: TDH_SHISS (L-threonine 3-dehydrogenase OS=Shigella sonnei (strain Ss046) GN=tdh PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22 Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 232 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 711 +P LG D+L++++ ICG+DVH + + PMV+GHE G + +G EVK GDRV+ E I+C C +C+GGR +LC + P G A +V PA FK+PDN+S + ++ +P +H ++ E +VL+ GAGPIG+ Sbjct: 20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGI 177 The following BLAST results are available for this feature:
BLAST of CX296641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296641 ID=CX296641; Name=CX296641; organism=Citrus clementina; type=EST; length=711bpback to top |