CX296656

Overview
NameCX296656
Unique NameCX296656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.230e-14
Identity = 51/145 (35.17%), Postives = 76/145 (52.41%), Query Frame = 2
Query:    2 EPKISDFGLARLM-NPIDTHLSTFVNGEFGDLGYVAPEYARTL--VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 427
            EP++SDFGLA++  N +D  +        G  GY+ PE+ +    + TPK DVY FG VL EL+TG++P       E    NLV W+  L    Q   AID  +   G + ++ + LK+   C    +P +RP+M +V   L+ I
Sbjct:  711 EPRLSDFGLAKVFGNGLDDEII------HGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKPIEDDYLDEK-DTNLVSWVRSLVRKNQASKAIDPKIQETGSEEQMEEALKIGYLCT-ADLPSKRPSMQQVVGLLKDI 847          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.230e-14
Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 2
Query:    8 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 427
            K++DFG+A++     +     ++G  G  GY+APEY  TL    K D+YSFG VLLELVTG++PT+     E    ++ +W+        L+  ID  L  K    E+ + + +   C  P +P  RP+M +V   L+ +
Sbjct:  834 KVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTD----SELGDKDMAKWVCTALDKCGLEPVIDPKLDLK-FKEEISKVIHIGLLCTSP-LPLNRPSMRKVVIMLQEV 967          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.230e-14
Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 2
Query:    2 EPKISDFGLARLMN---PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNEL-----------FQFLKVACNCVLPTIPKERPTMFEVYQFL 418
            E  + DFGLA+++      +T  +T   G +G   Y+APEYA +L AT K DVYS G VL+E+VTG+ PT      ET   ++V W+  +  T    +A +K      +D+EL           +Q L++A  C   + P+ERP+  +  ++L
Sbjct: 1092 EAHLGDFGLAKILTGNYDTNTESNTMFAGSYG---YIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEET---DMVRWVETVLDTPPGSEAREKL-----IDSELKSLLPCEEEAAYQVLEIALQCT-KSYPQERPSSRQASEYL 1232          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.219e-14
Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 2
Query:    8 KISDFGLARLMNPIDT--HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCL--VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 406
            K+SDFGL+RL++  +T  + S    G  G LGY+ PEY R    T K DVYSFG VLLE+VT ++  +  +  E    NLV +I ++    +L + ID  L   A  +D +  Q L    +  L    + RP+M EV
Sbjct:  505 KVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDV--NLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEV 639          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.219e-14
Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 2
Query:    8 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVY 409
            K+SDFG++R +   DTHL+T V G    +GYV PEY ++   T K DVYSFG +L+EL+TGE+P ++ +  E     L  +  +     +L + +D  +  +    E+    K+A  C L    + RPTM +V+
Sbjct:  530 KVSDFGISRSVAIDDTHLTTIVQGT---IGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEV--RMLGAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRC-LSLNSEHRPTMRDVF 657          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.510e-14
Identity = 57/145 (39.31%), Postives = 81/145 (55.86%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLST--FVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 427
            E K+SD+GL + +  +D+   T  F N     +GY+APE A+ +L A+ K DVYS+G VLLELVTG +P  V    E     L +++  L  TG   D  D+ L  +  +NEL Q +K+   C     P +RP+M EV Q L +I
Sbjct:  740 EAKLSDYGLEKFLPVMDSFGLTKKFHNA----VGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKP--VESPSENQVLILRDYVRDLLETGSASDCFDRRL-REFEENELIQVMKLGLLCTSEN-PLKRPSMAEVVQVLESI 876          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.510e-14
Identity = 49/135 (36.30%), Postives = 79/135 (58.52%), Query Frame = 2
Query:    8 KISDFGLARLMNPID--THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 406
            K++DFGL+R   PI+  TH+ST V G     GY+ PEY RT     K DVYSFG VLLE++T +   N ++     K ++ EW+  + + G +Q+ +D  L        +++ +++A +C+ P+  + RPTM +V
Sbjct:  732 KLADFGLSRSF-PIEGETHVSTVVAGT---PGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSRE----KPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSAR-RPTMSQV 857          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.510e-14
Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD-NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 427
            E  +SDFG+A+ +    TH ST+V    G +GY+ PEYART     K D+YSFG VLLEL+TG++  +        + NL + I   +    + +A+D  +    +D   + +  ++A  C     P ERPTM EV + L ++
Sbjct:  786 EAHLSDFGIAKSIPASKTHASTYV---LGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVD-------NEANLHQLILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRN-PLERPTMLEVSRVLLSL 917          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.510e-14
Identity = 55/169 (32.54%), Postives = 84/169 (49.70%), Query Frame = 2
Query:    5 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADILEELI 511
            PKI+DFGLA+L +   T    F +   G  GY+APEYA     + K DV+SFG +++E++TG+R  N     +    +L+ W+ +      +   ID  L A G  NE+ + + +   CV  +    RPTM  V   L +    Y FT      LP+    A +LE ++
Sbjct:  496 PKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTA-GSRNEILRCIHIGLLCVQES-AATRPTMATVSLMLNS----YSFT------LPTPLRPAFVLESVV 652          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.196e-14
Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 2
Query:    8 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 418
            KI+DFG+AR+     T  +T      G  GY++PEYA     + K DVYSFG ++LE+++G++ +NV +   T  GNLV +  +L S G   + +D         NE+ + + +A  CV     ++RPTM  + Q L
Sbjct:  491 KIADFGMARIFGMDQTEANT--RRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEE-AEDRPTMSAIVQML 624          
The following BLAST results are available for this feature:
BLAST of CX296656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
Y2242_ARATH3.230e-1435.17Probable LRR receptor-like serine/threonine-protei... [more]
RLK5_ARATH3.230e-1433.57Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
GSO2_ARATH3.230e-1433.99LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLQ_ARATH4.219e-1437.96Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLG_ARATH4.219e-1435.82Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
Y1124_ARATH5.510e-1439.31Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH5.510e-1436.30Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
ERL1_ARATH5.510e-1434.97LRR receptor-like serine/threonine-protein kinase ... [more]
CRK29_ARATH5.510e-1432.54Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK4_ARATH7.196e-1435.04Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC05801C12SK FerrChloL1 Citrus clementina cDNA clone C05801C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296656 ID=CX296656; Name=CX296656; organism=Citrus clementina; type=EST; length=513bp
TGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAACCCAATTG
ATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTTGGGTTAT
GTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGGGAGATGT
TTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAGAGACCTA
CCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGTTGAATGG
ATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTGATAAATG
CTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTTAAAGTTG
CATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTACCATGTTT
GAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATTTTACCAC
TGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGATATTCTTG
AAGAACTTATTGT
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