CX296656

Overview
NameCX296656
Unique NameCX296656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12
Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    8 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTED-EIMLPSDSGDADILE 502
            K+SDFG +R +    THL+T V G FG   Y+ PEY  +   T K DVYSFG VL+EL+TGE+P +  ++ E     L     +     ++ D ID  +  +   ++L    K+A  C L     +RP M E    L    ER   + ED E  + +D  +  ++E
Sbjct:  572 KVSDFGTSRSVTIDQTHLTTMVAGTFG---YMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEE--GRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKC-LSRKGIKRPNMREASLEL----ERIRSSPEDLEAHIENDDEEDQVME 727          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12
Identity = 48/140 (34.29%), Postives = 77/140 (55.00%), Query Frame = 2
Query:    8 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 427
            K++DFG +RL+      L+T V G    LGY+ PEY  T +   K DVYSFG VL+EL++GE+     + P++ K +LV +        +L + ID  ++ +    E+ +  ++A  C    + +ERP+M EV   L A+
Sbjct:  548 KVADFGASRLIPMDQEQLTTMVQGT---LGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKAL-CFERPQSSK-HLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECT-RIMGEERPSMKEVAAELEAL 681          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12
Identity = 53/148 (35.81%), Postives = 78/148 (52.70%), Query Frame = 2
Query:    2 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD-----AIDKCLVAKGVDNEL----FQFLKVACNCVLPTIPKERPTMFEVYQFL 418
            EP I DFGLAR+++      +T      G  GY+APE A   V + + DVYS+G VLLELVTG+R  +    PE    N+V W+  + S+ + +D      +D  LV + +D +L     Q   +A  C     P+ RP+M +V + L
Sbjct:  934 EPHIGDFGLARILDDSTVSTATVT----GTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALD-RSFPEDI--NIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELLDTKLREQAIQVTDLALRCT-DKRPENRPSMRDVVKDL 1073          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12
Identity = 58/167 (34.73%), Postives = 84/167 (50.30%), Query Frame = 2
Query:    5 PKISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL-SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADIL 499
            PK+SDFGLA+L    D +H+ST V G +G   Y APEYA T   T K DVYSFG V LEL+TG +  + ++ P   + NLV W   L +   +     D  L  +     L+Q L VA  C+       RP + +V   L  +  + +  ++D+     D   A ++
Sbjct:  227 PKLSDFGLAKLGPTGDKSHVSTRVMGTYG---YCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAID-SEMPHG-EQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQ-AATRPLIADVVTALSYLANQAYDPSKDDSRRNRDERGARLI 387          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12
Identity = 42/138 (30.43%), Postives = 74/138 (53.62%), Query Frame = 2
Query:    5 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 418
            PKI+DFG+AR+     T  +T      G  GY++PEY      + K DVYSFG ++LE+++G++ ++  +  +    NLV ++ +L     L + +D  +       E+ +++ +   CV    P +RPTM  ++Q L
Sbjct:  478 PKIADFGMARIFGVDQTVANT--GRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQM-DGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQEN-PADRPTMSTIHQML 611          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.315e-12
Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 2
Query:    8 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 406
            K++DFG ++L       L+T V G    LGY+ PEY  T +   K DVYSFG VL+EL++G++     + PET K +LV +    +   +L + ID  ++ +    E+ +  +VA  C      +ERP M EV
Sbjct:  248 KVADFGASKLKPMDKEQLTTMVQGT---LGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKAL-CFERPETSK-HLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECT-RLKGEERPRMIEV 374          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.315e-12
Identity = 50/140 (35.71%), Postives = 76/140 (54.29%), Query Frame = 2
Query:    8 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 427
            K+SDFG +R +    THL+T V+G    +GY+ PEY ++   T K DVYSFG VL+EL+TGE+  +  ++ E     L  +        +L D ID  +    + +++    KVA  C L    ++RP+M EV   L +I
Sbjct:  588 KVSDFGTSRTVTVDHTHLTTVVSGT---VGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQE--NRTLATYFILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKC-LNLKGRKRPSMREVSMELDSI 721          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.315e-12
Identity = 51/134 (38.06%), Postives = 68/134 (50.75%), Query Frame = 2
Query:    8 KISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 406
            K++DFGL++    +D TH+ST V G FG   Y+ PEY R    T K DVYSFG VL E++   RP      P     NL EW  +    GQL   ID+ L      + L +F +    C L     +RP+M +V
Sbjct:  624 KVADFGLSKTGPELDQTHVSTAVKGSFG---YLDPEYFRRQQLTDKSDVYSFGVVLFEVLCA-RPVIDPTLPREMV-NLAEWAMKWQKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKC-LADYGVDRPSMGDV 751          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12
Identity = 47/136 (34.56%), Postives = 75/136 (55.15%), Query Frame = 2
Query:    2 EPKISDFGLAR-LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 406
            E K++DFGL+R  +   +TH+ST V G     GY+ PEY RT   T K DVYSFG +LLE++T     + ++     K ++ EW+  + + G +Q  +D  L        +++ +++A +C L      RPTM +V
Sbjct:  716 EAKLADFGLSRSFLIEGETHVSTVVAGT---PGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSRE----KPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSC-LNHSSARRPTMSQV 843          
BLAST of CX296656 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12
Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 2
Query:    8 KISDFGLARLMNPID--THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 406
            K++DFGL+R   PID   H+ST V G     GY+ PEY RT   + K DVYSFG VLLE+VT +   +  +     + ++ +W+  + + G ++  +D  L+     N  ++ +++A  CV P+    RPTM  V
Sbjct:  723 KLADFGLSRSF-PIDGECHVSTVVAGT---PGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRE----RPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPS-SNRRPTMAHV 848          
The following BLAST results are available for this feature:
BLAST of CX296656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
WAKLE_ARATH1.772e-1233.73Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
WAK5_ARATH1.772e-1234.29Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
PEPR2_ARATH1.772e-1235.81Leucine-rich repeat receptor-like protein kinase P... [more]
PBS1_ARATH1.772e-1234.73Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
CRK18_ARATH1.772e-1230.43Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
WAKLS_ARATH2.315e-1235.34Putative wall-associated receptor kinase-like 16 O... [more]
WAKLH_ARATH2.315e-1235.71Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
HERK_ARATH2.315e-1238.06Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5182_ARATH3.023e-1234.56Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH3.023e-1235.56Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05801C12SK FerrChloL1 Citrus clementina cDNA clone C05801C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296656 ID=CX296656; Name=CX296656; organism=Citrus clementina; type=EST; length=513bp
TGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAACCCAATTG
ATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTTGGGTTAT
GTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGGGAGATGT
TTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAGAGACCTA
CCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGTTGAATGG
ATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTGATAAATG
CTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTTAAAGTTG
CATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTACCATGTTT
GAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATTTTACCAC
TGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGATATTCTTG
AAGAACTTATTGT
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