CX296663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296663 vs. ExPASy Swiss-Prot
Match: ATL1N_ARATH (RING-H2 finger protein ATL1N OS=Arabidopsis thaliana GN=ATL1N PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 469 GLDPAILRKIPVVAFNQQDF----KDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPL 666 GLD +I+ P ++ K+ LEC+VCL+E ED E RL+PKC H FH CID W +SH+TCPL Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPL 184
BLAST of CX296663 vs. ExPASy Swiss-Prot
Match: ATL3B_ARATH (RING-H2 finger protein ATL3B OS=Arabidopsis thaliana GN=ATL3B PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 469 GLDPAILRKIPVVAFN----QQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPL 666 GLD +++ P ++ Q+ K LECA+CL+E ED E RLLPKC+H FH CID W ++H TCP+ Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPV 168
BLAST of CX296663 vs. ExPASy Swiss-Prot
Match: ATL5H_ARATH (RING-H2 finger protein ATL5H OS=Arabidopsis thaliana GN=ATL5H PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13 Identity = 34/74 (45.95%), Postives = 43/74 (58.11%), Query Frame = 1 Query: 457 TLRAGLDPAILRKIPVVAFN----QQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPL 666 T+ GLD + P ++ Q+ K LECA+CL+E ED E RLLPKC+H FH CI W Q H TCP+ Sbjct: 91 TVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPV 164
BLAST of CX296663 vs. ExPASy Swiss-Prot
Match: ATL3D_ARATH (RING-H2 finger protein ATL3D OS=Arabidopsis thaliana GN=ATL3D PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 469 GLDPAILRKIPVVAFNQQ--DFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPL 666 GLDPA +R +PVV ++ + ++ EC +CL E+GEK ++LP C+H +H EC+D W ++ S+CPL Sbjct: 80 GLDPAEIRSLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPL 147
BLAST of CX296663 vs. ExPASy Swiss-Prot
Match: ATL2E_ARATH (RING-H2 finger protein ATL2E OS=Arabidopsis thaliana GN=ATL2E PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13 Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 457 TLRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPL 666 + R GLD +R +PV + + + +C +CLS+ E+GE +++P C H FHV+C+D W S+ TCPL Sbjct: 111 SFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPL 180
BLAST of CX296663 vs. ExPASy Swiss-Prot
Match: ATL1R_ARATH (RING-H2 finger protein ATL1R OS=Arabidopsis thaliana GN=ATL1R PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 448 PAVTLRAGLDPAILRKIPVVAFNQQD--FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCP 663 P GL +LR +P + ++ + +ECA+CL+E G++ R+LP+C HGFHV CID W SHS+CP Sbjct: 70 PVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCP 143
BLAST of CX296663 vs. ExPASy Swiss-Prot
Match: ATL1O_ARATH (RING-H2 finger protein ATL1O OS=Arabidopsis thaliana GN=ATL1O PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13 Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 469 GLDPAILRKIPVVAFNQQD-FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPL 666 GL +I+ I + + + D + +C VCL+E E+ E RLLPKCNH FH+ CID W SH+ CPL Sbjct: 151 GLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPL 217
BLAST of CX296663 vs. ExPASy Swiss-Prot
Match: ATL4F_ARATH (RING-H2 finger protein ATL4F OS=Arabidopsis thaliana GN=ATL4F PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 430 FAPGQDPAVTLRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPL 666 F P + T GL I +P+V + + + +C+VCL + + EK + +P C H FH+ECID+W SH+TCPL Sbjct: 59 FVPTNNNLSTAELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPL 137
BLAST of CX296663 vs. ExPASy Swiss-Prot
Match: ATL4E_ARATH (RING-H2 finger protein ATL4E OS=Arabidopsis thaliana GN=ATL4E PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 31/79 (39.24%), Postives = 44/79 (55.70%), Query Frame = 1 Query: 430 FAPGQDPAVTLRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPL 666 F P + T GL I +PVV + + +C+VCL + + EK + +P C H FH+ECID+W SH+TCPL Sbjct: 73 FVPTNNNLSTAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPL 151
BLAST of CX296663 vs. ExPASy Swiss-Prot
Match: ATL2G_ARATH (RING-H2 finger protein ATL2G OS=Arabidopsis thaliana GN=ATL2G PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 32/70 (45.71%), Postives = 41/70 (58.57%), Query Frame = 1 Query: 469 GLDPAILRKIPVVAFNQQDF----KDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPL 666 GLD + P +++ K G+ECAVCL E ED E RL+P C H FH +C+D+W HSTCPL Sbjct: 106 GLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPL 175 The following BLAST results are available for this feature:
BLAST of CX296663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296663 ID=CX296663; Name=CX296663; organism=Citrus clementina; type=EST; length=667bpback to top |