CX296681

Overview
NameCX296681
Unique NameCX296681
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: YOF5_CAEEL (Uncharacterized oxidoreductase ZK1290.5 OS=Caenorhabditis elegans GN=ZK1290.5 PE=2 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 2.037e-24
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = -1
Query:  309 TWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIPPAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAKNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW 701
            TW+ ME LY+    R+IGVSN+S++ L +LLE A I P  NQVE HP + Q  L+ +C   G+   GY PL   K     L++  +  +A K  KSPAQ+ LRW +Q     +PKS +  RLKEN ++FD+
Sbjct:  124 TWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQVELHPWFHQADLKNYCDELGILTMGYCPLAKGK----YLEDETLCKIASKYQKSPAQICLRWSIQQNVPTVPKSTDCRRLKENTNVFDF 250          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.037e-24
Identity = 57/151 (37.75%), Postives = 98/151 (64.90%), Query Frame = -1
Query:  294 RPDIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAKN-------THRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDWCVPED 719
            + ++ +TW+AMEA  D+G  +++GVSNF+ ++L  +L    +   P  NQVECHP + Q KL  FC+   + ++ YSPLG+++N       +  +L++ ++N++ ++  K+ AQ+ LR+ +Q G  V+PKS N  R+KENF IFD+ + E+
Sbjct:  144 KSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEE 294          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.660e-24
Identity = 57/131 (43.51%), Postives = 82/131 (62.60%), Query Frame = -1
Query:  309 TWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIPPAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAKNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW 701
            T+KA   L D G+ R+IGVSNF  + L  L+E   I PAVNQ+E HP   Q +L+      G+    +SPLG       +L +P++  +AE+ GK+PAQV +RW +Q+G+ V+PKS N  R+  NFD+FD+
Sbjct:  119 TFKAFAHLRDQGRIRSIGVSNFEPEHLTTLIEETGIVPAVNQIELHPLLPQQELRDVHAKLGIATEAWSPLGQGS----LLADPVITGIAEQHGKTPAQVLIRWHIQLGNIVIPKSVNPERIASNFDVFDF 245          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: AK1C1_PONAB (Aldo-keto reductase family 1 member C1 homolog OS=Pongo abelii GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.660e-24
Identity = 62/144 (43.06%), Postives = 93/144 (64.58%), Query Frame = -1
Query:  309 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAK-------NTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW 713
            D+ +TW+AME   D+G A++IGVSNF+ ++L  +L    +   P  NQVECHP + Q KL  FCKSK + L  YS LGS +       N+  +L++P++  +A+K  ++PA +ALR+ LQ G  VL KS NE R+++N  +FD+
Sbjct:  143 DLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEKWVDPNSPVLLEDPVLCALAKKHKQTPALIALRYQLQRGVVVLAKSYNEQRIRQNMQVFDF 286          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: AK1C3_PONAB (Aldo-keto reductase family 1 member C3 homolog OS=Pongo abelii GN=AKR1C3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.474e-24
Identity = 64/153 (41.83%), Postives = 98/153 (64.05%), Query Frame = -1
Query:  285 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAK-------NTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW-CVPEDLLA 713
            D+ +TW+AME   D+G A++IGVSNF+ ++L  +L    +   P  NQVECHP + ++KL  FCKSK + L  YS LGS +       N+  +L++P++  +A+K  ++PA +ALR+ LQ G  VL KS NE R++EN  +F++    ED+ A
Sbjct:  143 DLCTTWEAMEECKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRENVQVFEFQLTAEDMRA 295          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: AK1D1_RABIT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagus cuniculus GN=AKR1D1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.537e-24
Identity = 59/151 (39.07%), Postives = 95/151 (62.91%), Query Frame = -1
Query:  294 RPDIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAKNTHRV-------LQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDWCVPED 719
            + ++ +TW+A+EA  D+G  +++GVSNF+ ++L  LL    +   P  NQVECHP + Q KL  FC+   + +  YSPLG+ +N   V       L++ ++N++ +K  K+ AQ+ LR+ +Q G  V+PKS N  R+KENF IFD+ + E+
Sbjct:  144 KTNLCATWEALEACKDAGLVKSLGVSNFNRQQLELLLNKPGLKHKPVCNQVECHPYFTQPKLLKFCQQHDIIIVAYSPLGTCRNPMWVNTSLPPLLKDTLLNSLGKKYKKTAAQIVLRFNVQRGVVVIPKSFNPERIKENFQIFDFSLTEE 294          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: AK1CO_HORSE (Aldo-keto reductase family 1 member C23-like protein OS=Equus caballus GN=PGFS PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.537e-24
Identity = 62/144 (43.06%), Postives = 92/144 (63.89%), Query Frame = -1
Query:  309 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGS-------AKNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW 713
            D+ +TW+AME   D+G A++IGVSNF+ ++L  +L    +   P  NQVECHP   Q+KL  FCKSK + L  Y  LG+       A N+  +L++P++  +A+K  ++PA +ALR+ LQ G  VL KS NE R+KEN  +F++
Sbjct:  143 DLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAYGALGTQRLKRWLAPNSPVLLEDPVLCAMAKKYKRTPALIALRYLLQRGVVVLAKSYNEKRIKENMQVFEF 286          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFU (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fuscata fuscata GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.926e-24
Identity = 65/153 (42.48%), Postives = 96/153 (62.75%), Query Frame = -1
Query:  285 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAK-------NTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW-CVPEDLLA 713
            D+ +TW+AME   D+G A++IGVSNF+ ++L  +L    +   P  NQVECHP   Q KL  FCKSK + L  YS LGS +       N+  +L++P++  +A+K  ++PA +ALR+ LQ G  VL KS NE R++EN  +F++    ED+ A
Sbjct:  143 DLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQRKLLDFCKSKDIVLVAYSALGSHREKPWVDQNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRENMKVFEFQLTSEDMKA 295          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: YPR1_YEAST (Putative reductase 1 OS=Saccharomyces cerevisiae GN=YPR1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24
Identity = 60/138 (43.48%), Postives = 84/138 (60.87%), Query Frame = -1
Query:  294 TWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIAC--IPPAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAKNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDWCVPED 701
            TW+ M+ L  +GK +A+GVSNFS+  + +LLE     + PA NQ+E HP   Q +L AFCK KG+ +  YSP GSA     +L+   +  +A+K G  PAQ+ + W +Q G+ VL KS N  R+  NF IF   +PED
Sbjct:  150 TWELMQELPKTGKTKAVGVSNFSINNIKELLESPNNKVVPATNQIEIHPLLPQDELIAFCKEKGIVVEAYSPFGSANAP--LLKEQAIIDMAKKHGVEPAQLIISWSIQRGYVVLAKSVNPERIVSNFKIF--TLPED 283          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: ALDR_BOVIN (Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24
Identity = 59/143 (41.26%), Postives = 84/143 (58.74%), Query Frame = -1
Query:  309 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGS------AKNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW 713
            D   TW AME L D G  +AIGVSNF+  ++  +L    +   PAVNQ+ECHP   Q KL  +C SKG+ ++ YSPLGS            +L++P +  +A+K  K+ AQV +R+ +Q    V+PKS    R+ ENF +FD+
Sbjct:  136 DFVDTWTAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIECHPYLTQEKLIQYCNSKGIVVTAYSPLGSPDRPWAKPEDPSILEDPRIKAIADKYNKTTAQVLIRFPIQRNLIVIPKSVTPERIAENFQVFDF 278          
The following BLAST results are available for this feature:
BLAST of CX296681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
YOF5_CAEEL2.037e-2443.51Uncharacterized oxidoreductase ZK1290.5 OS=Caenorh... [more]
AK1D1_HUMAN2.037e-2437.753-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]
Y2408_MYCS22.660e-2443.51Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]
AK1C1_PONAB2.660e-2443.06Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C3_PONAB3.474e-2441.83Aldo-keto reductase family 1 member C3 homolog OS=... [more]
AK1D1_RABIT4.537e-2439.073-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagu... [more]
AK1CO_HORSE4.537e-2443.06Aldo-keto reductase family 1 member C23-like prote... [more]
AK1C1_MACFU5.926e-2442.48Aldo-keto reductase family 1 member C1 homolog OS=... [more]
YPR1_YEAST7.739e-2443.48Putative reductase 1 OS=Saccharomyces cerevisiae G... [more]
ALDR_BOVIN7.739e-2441.26Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05801F05SK FerrChloL1 Citrus clementina cDNA clone C05801F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296681 ID=CX296681; Name=CX296681; organism=Citrus clementina; type=EST; length=764bp
TAACTTCGAGCTCTTGTTCTTGTGATCCAACGTCCAACAATAATGCTACA
TTTGAGTTCACACAATCTGCACTTCTCTACAACAAATGCTGATTGAGAGC
TCTAGTGTCATTGACCATGAGTAGGTTTTAAATAGAAAGTAGAGCAAAAT
CCTATGTCTGAAATATCACATCCACCTCAAATTTCACCATCCCAAAGCTC
TTCAAGGGTCCTGTATATGCCAAAATTCTCGTGCACAAATCCGGCACCTT
TTACAAGCCTCTCCTGCTCAATTTCAGGAAATTTGGCCAATAAGTCTTCA
GGTACACACCAATCAAAAATATCAAAATTTTCCTTCAACCTAGCCTCATT
TGCGCTCTTAGGCAGAACACTGTGACCCATTTGCAGCCCCCAGCGAAGAG
CCACTTGTGCAGGAGACTTACCCAATTTCTCTGCAACTGTATTGACAATT
GGATTTTGAAGAACTCGGTGTGTGTTCTTGGCAGAACCAAGTGGCGAATA
ACCAGATAAGTGAACCCCCTTGGATTTACAAAATGCTTGTAGCTTTGTCT
GTTGCCATGCTGGGTGGCATTCCACTTGATTTACAGCAGGTGGAATACAT
GCTATTTCCAACAAATCCCCAAGTTTCTTCAAAGAGAAATTACTCACTCC
AATTGCCCGAGCTTTTCCTGAATCATAAAGTGCCTCCATTGCTTTCCATG
TACTAGGTATGTCAGGTCGGGTCAGATTTCAGGCTTCGCATCTGACCCCT
TTTTATGCTGACTG
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