CX296681

Overview
NameCX296681
Unique NameCX296681
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: AK1C3_HUMAN (Aldo-keto reductase family 1 member C3 OS=Homo sapiens GN=AKR1C3 PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24
Identity = 63/153 (41.18%), Postives = 98/153 (64.05%), Query Frame = -1
Query:  285 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAK-------NTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW-CVPEDLLA 713
            D+ +TW+AME   D+G A++IGVSNF+ ++L  +L    +   P  NQVECHP + ++KL  FCKSK + L  YS LGS +       N+  +L++P++  +A+K  ++PA +ALR+ LQ G  VL KS NE R+++N  +F++    ED+ A
Sbjct:  143 DLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKA 295          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: GCY_YEAST (Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.011e-23
Identity = 60/140 (42.86%), Postives = 83/140 (59.29%), Query Frame = -1
Query:  315 NLTRPDIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIAC--IPPAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAKNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIF 728
            ++T  +   TW+ M+ L  +GK +A+GVSNFS+  L DLL      + PA NQVE HP   Q +L  FCKSKG+ +  YSPLGS      +L+ P++  +A+K    P  V + W +Q G+ VLPKS N  R+K N  IF
Sbjct:  141 DITNWNFIKTWELMQELPKTGKTKAVGVSNFSINNLKDLLASQGNKLTPAANQVEIHPLLPQDELINFCKSKGIVVEAYSPLGSTDAP--LLKEPVILEIAKKNNVQPGHVVISWHVQRGYVVLPKSVNPDRIKTNRKIF 278          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.724e-23
Identity = 59/143 (41.26%), Postives = 86/143 (60.14%), Query Frame = -1
Query:  309 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGS------AKNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW 713
            D   TW+AME L D G  ++IGVSNF+  ++  +L    +   PAVNQ+ECHP   Q KL  +C SKG+ ++ YSPLGS            +L++P +  +A+K  K+ AQV +R+ +Q    V+PKS   AR+ ENF +FD+
Sbjct:  137 DFLDTWEAMEGLVDEGLVKSIGVSNFNHLQIERILNKPGLKYKPAVNQIECHPYLTQEKLIQYCHSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIADKHKKTTAQVLIRFPMQRNLVVIPKSVTPARIAENFQVFDF 279          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.724e-23
Identity = 62/150 (41.33%), Postives = 88/150 (58.67%), Query Frame = -1
Query:  291 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGS------AKNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW-CVPEDL 713
            D   TW+AME L D G  +AIGVSNF+  ++  +L    +   PAVNQ+E HP   Q KL  +CKSKG+ ++ YSPLGS            +L++P +  +A K  K+ AQV +R+ +Q    V+PKS    R+ ENF +FD+   PED+
Sbjct:  137 DFVETWEAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIEVHPYLTQEKLIEYCKSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKYNKTTAQVLIRFPMQRNLIVIPKSVTPERIAENFQVFDFELSPEDM 286          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFA (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fascicularis GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.724e-23
Identity = 64/153 (41.83%), Postives = 96/153 (62.75%), Query Frame = -1
Query:  285 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAK-------NTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW-CVPEDLLA 713
            D+ +TW+AME   D+G A++IGVSNF+ ++L  +L    +   P  NQVECHP   Q KL  FCKSK + L  +S LGS +       N+  +L++P++  +A+K  ++PA +ALR+ LQ G  VL KS NE R++EN  +F++    ED+ A
Sbjct:  143 DLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQRKLLDFCKSKDIVLVAFSALGSHREKPWVDQNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRENMKVFEFQLTSEDMKA 295          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.252e-23
Identity = 63/153 (41.18%), Postives = 93/153 (60.78%), Query Frame = -1
Query:  285 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSA-------KNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW-CVPEDLLA 713
            D+  TW+A+E   D+G  ++IGVSNF+ K+L  +L    +   P  NQVECHP   Q+KL  FCKS  + L  Y+ LG+         N   +L++P++  +A+K  ++PA VALR+ +Q G  VL KS N+ R+KEN  +FD+   PED+ A
Sbjct:  143 DLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLEFCKSHDIVLVAYAALGAQLLSEWVNSNNPVLLEDPVLCAIAKKHKQTPALVALRYQVQRGVVVLAKSFNKKRIKENMQVFDFELTPEDMKA 295          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.252e-23
Identity = 63/153 (41.18%), Postives = 93/153 (60.78%), Query Frame = -1
Query:  285 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSA-------KNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW-CVPEDLLA 713
            D+  TW+A+E   D+G  ++IGVSNF+ K+L  +L    +   P  NQVECHP   Q+KL  FCKS  + L  Y+ LG+         N   +L++P++  +A+K  ++PA VALR+ +Q G  VL KS N+ R+KEN  +FD+   PED+ A
Sbjct:  143 DLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLEFCKSHDIVLVAYAALGAQLLSEWVNSNNPVLLEDPVLCAIAKKHKQTPALVALRYQVQRGVVVLAKSFNKKRIKENMQVFDFELTPEDMKA 295          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: AK1C2_HUMAN (Aldo-keto reductase family 1 member C2 OS=Homo sapiens GN=AKR1C2 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.252e-23
Identity = 61/144 (42.36%), Postives = 92/144 (63.89%), Query Frame = -1
Query:  309 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAK-------NTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW 713
            D+ +TW+AME   D+G A++IGVSNF+ + L  +L    +   P  NQVECHP + Q KL  FCKSK + L  YS LGS +       N+  +L++P++  +A+K  ++PA +ALR+ LQ G  VL KS NE R+++N  +F++
Sbjct:  143 DLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEF 286          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.252e-23
Identity = 60/144 (41.67%), Postives = 93/144 (64.58%), Query Frame = -1
Query:  309 DIPSTWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIP--PAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAK-------NTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDW 713
            D+ +TW+A+E   D+G A++IGVSNF+ ++L  +L    +   P  NQVECHP + Q KL  FCKSK + L  YS LGS +       N+  +L++P++  +A+K  ++PA +ALR+ LQ G  VL KS NE R+++N  +F++
Sbjct:  143 DLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEF 286          
BLAST of CX296681 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.941e-23
Identity = 58/145 (40.00%), Postives = 85/145 (58.62%), Query Frame = -1
Query:  267 TWKAMEALYDSGKARAIGVSNFSLKKLGDLLEIACIPPAVNQVECHPAWQQTKLQAFCKSKGVHLSGYSPLGSAKNTHRVLQNPIVNTVAEKLGKSPAQVALRWGLQMGHSVLPKSANEARLKENFDIFDWCVPEDLLAKFPEIE 701
            T+KA   L + G+ R+IGVSNF  + L  L++   I PAVNQ+E HP   Q +L+      G+    +SPLG       +L +P V  VAE  GK+ AQ  +RW +Q+G+ V+PKS N  R++ NFD+FD+ + E  +A    +E
Sbjct:  120 TFKAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGIATEAWSPLGQGS----LLAHPTVTGVAESHGKTAAQALIRWHMQLGNIVIPKSVNPQRIESNFDVFDFELSEQDMASISSLE 260          
The following BLAST results are available for this feature:
BLAST of CX296681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
AK1C3_HUMAN7.739e-2441.18Aldo-keto reductase family 1 member C3 OS=Homo sap... [more]
GCY_YEAST1.011e-2342.86Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE... [more]
ALDR_RABIT1.724e-2341.26Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
ALDR_PIG1.724e-2341.33Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
AK1C1_MACFA1.724e-2341.83Aldo-keto reductase family 1 member C1 homolog OS=... [more]
PGFS2_BOVIN2.252e-2341.18Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]
PGFS1_BOVIN2.252e-2341.18Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
AK1C2_HUMAN2.252e-2342.36Aldo-keto reductase family 1 member C2 OS=Homo sap... [more]
AK1C1_HUMAN2.252e-2341.67Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]
Y1985_MYCSK2.941e-2340.00Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05801F05SK FerrChloL1 Citrus clementina cDNA clone C05801F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296681 ID=CX296681; Name=CX296681; organism=Citrus clementina; type=EST; length=764bp
TAACTTCGAGCTCTTGTTCTTGTGATCCAACGTCCAACAATAATGCTACA
TTTGAGTTCACACAATCTGCACTTCTCTACAACAAATGCTGATTGAGAGC
TCTAGTGTCATTGACCATGAGTAGGTTTTAAATAGAAAGTAGAGCAAAAT
CCTATGTCTGAAATATCACATCCACCTCAAATTTCACCATCCCAAAGCTC
TTCAAGGGTCCTGTATATGCCAAAATTCTCGTGCACAAATCCGGCACCTT
TTACAAGCCTCTCCTGCTCAATTTCAGGAAATTTGGCCAATAAGTCTTCA
GGTACACACCAATCAAAAATATCAAAATTTTCCTTCAACCTAGCCTCATT
TGCGCTCTTAGGCAGAACACTGTGACCCATTTGCAGCCCCCAGCGAAGAG
CCACTTGTGCAGGAGACTTACCCAATTTCTCTGCAACTGTATTGACAATT
GGATTTTGAAGAACTCGGTGTGTGTTCTTGGCAGAACCAAGTGGCGAATA
ACCAGATAAGTGAACCCCCTTGGATTTACAAAATGCTTGTAGCTTTGTCT
GTTGCCATGCTGGGTGGCATTCCACTTGATTTACAGCAGGTGGAATACAT
GCTATTTCCAACAAATCCCCAAGTTTCTTCAAAGAGAAATTACTCACTCC
AATTGCCCGAGCTTTTCCTGAATCATAAAGTGCCTCCATTGCTTTCCATG
TACTAGGTATGTCAGGTCGGGTCAGATTTCAGGCTTCGCATCTGACCCCT
TTTTATGCTGACTG
back to top