CX296690
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_TRIEI (Cytochrome b6-f complex iron-sulfur subunit OS=Trichodesmium erythraeum (strain IMS101) GN=petC PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.152e-49 Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = -1
Query: 337 LANTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 666
LAN H G+RTL +GLKGDPTY+V+E ++TLA YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY+N G+VVRGPAPLSLAL HAN+ + K+VF W ETDFRTGE PWW
Sbjct: 70 LAN-HNSGERTLAQGLKGDPTYVVIEGEQTLAEYGLNAVCTHLGCVVPWNGSENKFICPCHGSQYDNTGKVVRGPAPLSLALVHANVSDDKLVFTQWEETDFRTGEKPWW 178 HSP 2 Score: 27.7202 bits (60), Expect = 1.152e-49 Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = -2
Query: 660 TAKDAIGNDIIAADWL 707
TAKDA+GNDII +++L
Sbjct: 55 TAKDALGNDIIVSEFL 70
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP2 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petC PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 7.366e-49 Identity = 81/109 (74.31%), Postives = 94/109 (86.24%), Query Frame = -1
Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 657
TH GDR+L +GLKGDPTY+VVE D T++SYGINA+CTHLGCVVPWN+AENKF+CPCHGSQY+ G+VVRGPAPLSLAL HA + E+ K+ F WTETDFRT EAPWWA
Sbjct: 72 THTAGDRSLAQGLKGDPTYVVVEGDNTISSYGINAICTHLGCVVPWNTAENKFMCPCHGSQYDETGKVVRGPAPLSLALVHAEVTEDDKISFTDWTETDFRTDEAPWWA 180 HSP 2 Score: 28.4906 bits (62), Expect = 7.366e-49 Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = -2
Query: 648 AKDAIGNDIIAADWL-TRTA 704
AKDA+GNDII +D+L T TA
Sbjct: 56 AKDALGNDIIVSDYLQTHTA 75
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_CYAP4 (Cytochrome b6-f complex iron-sulfur subunit OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=petC PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.358e-47 Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = -1
Query: 337 HGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 654
H DR L +GLKGDPTY+VV+ D T+ YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY+N G+VVRGPAPLSLALAHA + + K+ F PWTETDFRTG+ PWW
Sbjct: 73 HPANDRALAQGLKGDPTYIVVQDDHTIGDYGLNAVCTHLGCVVPWNISENKFICPCHGSQYDNTGKVVRGPAPLSLALAHAAVSDDKITFTPWTETDFRTGKEPWW 178 HSP 2 Score: 25.7942 bits (55), Expect = 1.358e-47 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = -2
Query: 654 AKDAIGNDIIAADWLTR 704
AKDA+GNDI +D+L +
Sbjct: 56 AKDALGNDISVSDFLAK 72
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_CYAPA (Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle OS=Cyanophora paradoxa GN=petC-1 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.996e-47 Identity = 79/108 (73.15%), Postives = 94/108 (87.04%), Query Frame = -1
Query: 337 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWW 657
TH PGDR+L +GLKGD TYL+V++D TL +YG+NAVCTHLGCVVPWN++ENKF+CPCHGSQY+ G+VVRGPAPLSLALAH ++ E+G V F PWTETDFRT APWW
Sbjct: 131 THKPGDRSLAQGLKGDATYLIVKEDGTLENYGLNAVCTHLGCVVPWNASENKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVSVLEDGVVAFEPWTETDFRTNTAPWW 238 HSP 2 Score: 25.7942 bits (55), Expect = 2.996e-47 Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = -2
Query: 660 AKDAIGNDIIAADWL 704
AKDA+GND+ + WL
Sbjct: 115 AKDALGNDVKVSSWL 129
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 8.678e-47 Identity = 79/108 (73.15%), Postives = 90/108 (83.33%), Query Frame = -1
Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657
+H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+ G+VVRGPAP SLAL+HA EN K+V PWTETDFRTGE PWW+
Sbjct: 72 SHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHAKTENDKIVLTPWTETDFRTGEEPWWS 179 HSP 2 Score: 22.3274 bits (46), Expect = 8.678e-47 Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = -2
Query: 642 TAKDAIGNDIIAADWLTRTALG 707
TAKD +GND+ + +L +G
Sbjct: 55 TAKDELGNDVSVSKFLESHNVG 76
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIB_SYNY3 (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Synechocystis sp. (strain PCC 6803) GN=petC2 PE=3 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 2.504e-46 Identity = 79/109 (72.48%), Postives = 94/109 (86.24%), Query Frame = -1
Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 657
+H GDR L +GLKGDPTY+VV+ D T+A+YGINAVCTHLGCVVPWN++ENKF+CPCHGSQYN +G+VVRGPAPLSLALAHA + ++ K+V WTETDFRT E PWWA
Sbjct: 72 SHNAGDRVLAQGLKGDPTYIVVQGDDTIANYGINAVCTHLGCVVPWNASENKFMCPCHGSQYNAEGKVVRGPAPLSLALAHATVTDDDKLVLSTWTETDFRTDEDPWWA 180 HSP 2 Score: 24.2534 bits (51), Expect = 2.504e-46 Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = -2
Query: 660 TAKDAIGNDIIAADWL 707
TAKDA+GND+ ++L
Sbjct: 55 TAKDALGNDVKVTEFL 70
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP6 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petC PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.263e-46 Identity = 78/107 (72.90%), Postives = 89/107 (83.18%), Query Frame = -1
Query: 334 HGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 654
H GDRTL +GLKGDPTYLVVE + + YGINAVCTHLGCVVPWN++ENKF CPCHGSQY+ G+VVRGPAPLSLALAH ++ + KV PWTETDFRTG+ PWWA
Sbjct: 73 HNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAHVSVTDDKVFLSPWTETDFRTGDNPWWA 179 HSP 2 Score: 23.8682 bits (50), Expect = 3.263e-46 Identity = 9/21 (42.86%), Postives = 15/21 (71.43%), Query Frame = -2
Query: 642 AKDAIGNDIIAADWLTRTALG 704
AKDA+GND++ + +L +G
Sbjct: 56 AKDALGNDVVLSKFLADHNVG 76
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_SYNE7 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus (strain PCC 7942) GN=petC PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.263e-46 Identity = 78/107 (72.90%), Postives = 89/107 (83.18%), Query Frame = -1
Query: 334 HGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 654
H GDRTL +GLKGDPTYLVVE + + YGINAVCTHLGCVVPWN++ENKF CPCHGSQY+ G+VVRGPAPLSLALAH ++ + KV PWTETDFRTG+ PWWA
Sbjct: 73 HNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAHVSVTDDKVFLSPWTETDFRTGDNPWWA 179 HSP 2 Score: 23.8682 bits (50), Expect = 3.263e-46 Identity = 9/21 (42.86%), Postives = 15/21 (71.43%), Query Frame = -2
Query: 642 AKDAIGNDIIAADWLTRTALG 704
AKDA+GND++ + +L +G
Sbjct: 56 AKDALGNDVVLSKFLADHNVG 76
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_PROMM (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9313) GN=petC PE=3 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 4.253e-46 Identity = 80/110 (72.73%), Postives = 90/110 (81.82%), Query Frame = -1
Query: 337 LANTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 666
LAN H GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQYN+ G+VVRGPAPLSLALA+ +EN V WTETDFRTGE PWW
Sbjct: 69 LAN-HSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVRGPAPLSLALANIAVENDNVFVSQWTETDFRTGEKPWW 177 HSP 2 Score: 24.2534 bits (51), Expect = 4.253e-46 Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = -2
Query: 642 TAKDAIGNDIIAADWLTRTALG 707
+AKD +GN + A+ WL + G
Sbjct: 54 SAKDELGNSVTASGWLANHSDG 75
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_PROM3 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9303) GN=petC PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 4.253e-46 Identity = 80/110 (72.73%), Postives = 90/110 (81.82%), Query Frame = -1
Query: 337 LANTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 666
LAN H GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQYN+ G+VVRGPAPLSLALA+ +EN V WTETDFRTGE PWW
Sbjct: 69 LAN-HSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVRGPAPLSLALANIAVENDNVFVSQWTETDFRTGEKPWW 177 HSP 2 Score: 24.2534 bits (51), Expect = 4.253e-46 Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = -2
Query: 642 TAKDAIGNDIIAADWLTRTALG 707
+AKD +GN + A+ WL + G
Sbjct: 54 SAKDELGNSVTASGWLANHSDG 75 The following BLAST results are available for this feature:
BLAST of CX296690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296690 ID=CX296690; Name=CX296690; organism=Citrus clementina; type=EST; length=708bpback to top |