CX296690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_ANASP (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=petC1 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 7.224e-46 Identity = 78/108 (72.22%), Postives = 89/108 (82.41%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 +H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+ G+VVRGPAP SLAL+HA EN K+V WTETDFRTGE PWW+ Sbjct: 72 SHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHAKTENDKIVLTSWTETDFRTGEEPWWS 179 HSP 2 Score: 22.3274 bits (46), Expect = 7.224e-46 Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = -2 Query: 642 TAKDAIGNDIIAADWLTRTALG 707 TAKD +GND+ + +L +G Sbjct: 55 TAKDELGNDVSVSKFLESHNVG 76
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPW (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH7803) GN=petC PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 9.415e-46 Identity = 77/109 (70.64%), Postives = 90/109 (82.57%), Query Frame = -1 Query: 334 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 660 +TH GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY+ G+VVRGPAPLSLALA+ ++EN V WT+TDFRTGE PWWA Sbjct: 70 STHPAGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVENDNVFVSQWTDTDFRTGEKPWWA 178 HSP 2 Score: 23.8682 bits (50), Expect = 9.415e-46 Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = -2 Query: 642 TAKDAIGNDIIAADWLTRTALG 707 +AKD +GN + A+ WL+ G Sbjct: 54 SAKDELGNAVTASGWLSTHPAG 75
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_NOSSP (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc sp. (strain PCC 7906) GN=petC PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.599e-45 Identity = 77/104 (74.04%), Postives = 88/104 (84.62%), Query Frame = -1 Query: 334 GDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 645 GDR L +GLKGDPTY+VVE + + YGINA+CTHLGCVVPWN AENKF CPCHGSQY+ G+VVRGPAPLSLALAHAN + K++ PWTETDFRTG+APWWA Sbjct: 76 GDRALVQGLKGDPTYIVVENKQAIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVRGPAPLSLALAHANTVDDKIILSPWTETDFRTGDAPWWA 179 HSP 2 Score: 21.9422 bits (45), Expect = 1.599e-45 Identity = 9/22 (40.91%), Postives = 13/22 (59.09%), Query Frame = -2 Query: 642 TAKDAIGNDIIAADWLTRTALG 707 TAKD +GND+ + +L G Sbjct: 55 TAKDELGNDVSLSKFLENRNAG 76
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_NOSP7 (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=petC PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.084e-45 Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = -1 Query: 334 GDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 645 GDR L +GLKGDPTY+VV+ + + YGINA+CTHLGCVVPWN AENKF CPCHGSQY+ G+VVRGPAPLSLALAH N+ + K+V PWTETDFRTG+APWW+ Sbjct: 76 GDRNLVQGLKGDPTYIVVDSKEAIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVRGPAPLSLALAHTNVSDDKIVLTPWTETDFRTGDAPWWS 179 HSP 2 Score: 21.9422 bits (45), Expect = 2.084e-45 Identity = 9/22 (40.91%), Postives = 12/22 (54.55%), Query Frame = -2 Query: 642 TAKDAIGNDIIAADWLTRTALG 707 TAKD +GND+ +L G Sbjct: 55 TAKDELGNDVSVTKFLENRNAG 76
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIB_CYAPA (Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle OS=Cyanophora paradoxa GN=petC-2 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 2.705e-45 Identity = 78/108 (72.22%), Postives = 90/108 (83.33%), Query Frame = -1 Query: 337 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWW 657 T PGDR+L +GLKGD TYL+V++D TL YG+NAVCTHLGCVVPWN +E KF+CPCHGSQY+ G+VVRGPAPLSLALAH N+ E+G V F PWTETDFRT APWW Sbjct: 133 TXKPGDRSLAQGLKGDATYLIVKEDGTLEKYGLNAVCTHLGCVVPWNQSEGKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVNVLEDGVVAFEPWTETDFRTNTAPWW 240 HSP 2 Score: 23.8682 bits (50), Expect = 2.705e-45 Identity = 10/15 (66.67%), Postives = 10/15 (66.67%), Query Frame = -2 Query: 660 AKDAIGNDIIAADWL 704 AKDA GNDI WL Sbjct: 117 AKDAAGNDIKVEKWL 131
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_SYNSC (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9605) GN=petC PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.716e-45 Identity = 75/109 (68.81%), Postives = 91/109 (83.49%), Query Frame = -1 Query: 334 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 660 ++H GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY++ G+VVRGPAPLSLALA+ ++EN V WTETDFRTG+ PWWA Sbjct: 70 SSHPEGDRSLVQGLKGDPTYLIVEGEDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDSTGKVVRGPAPLSLALANVSVENDNVFVSQWTETDFRTGDKPWWA 178 HSP 2 Score: 24.2534 bits (51), Expect = 2.716e-45 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = -2 Query: 657 TAKDAIGNDIIAADWLT 707 +AKD +GN I A+ WL+ Sbjct: 54 SAKDELGNPITASGWLS 70
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_VOLCA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Volvox carteri GN=petC PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.604e-45 Identity = 78/109 (71.56%), Postives = 91/109 (83.49%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 657 TH GDR+L++GLKGDPTYL+V D T+ YG+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPLSLALAH ++ E+G V F W+ETDFRTG PWWA Sbjct: 98 THQKGDRSLSQGLKGDPTYLIVTADGTIEKYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVQEDGLVTFSTWSETDFRTGLEPWWA 206 HSP 2 Score: 25.7942 bits (55), Expect = 4.604e-45 Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = -2 Query: 660 AKDAIGNDIIAADWL 704 AKDA+GNDI A WL Sbjct: 82 AKDALGNDIKANAWL 96
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_PROMT (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL2A) GN=petC PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 4.613e-45 Identity = 74/108 (68.52%), Postives = 91/108 (84.26%), Query Frame = -1 Query: 337 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 660 +TH GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS NK++CPCHGSQY++ G+VVRGPAPLSLA+AH +IE+ +V+ WTETDFRTG PWW Sbjct: 70 STHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWW 177 HSP 2 Score: 25.0238 bits (53), Expect = 4.613e-45 Identity = 9/21 (42.86%), Postives = 15/21 (71.43%), Query Frame = -2 Query: 642 AKDAIGNDIIAADWLTRTALG 704 AKD +GN++ A+ WL+ +G Sbjct: 55 AKDELGNNVSASGWLSTHPVG 75
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_PROM1 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL1A) GN=petC PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 4.613e-45 Identity = 74/108 (68.52%), Postives = 91/108 (84.26%), Query Frame = -1 Query: 337 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 660 +TH GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS NK++CPCHGSQY++ G+VVRGPAPLSLA+AH +IE+ +V+ WTETDFRTG PWW Sbjct: 70 STHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWW 177 HSP 2 Score: 25.0238 bits (53), Expect = 4.613e-45 Identity = 9/21 (42.86%), Postives = 15/21 (71.43%), Query Frame = -2 Query: 642 AKDAIGNDIIAADWLTRTALG 704 AKD +GN++ A+ WL+ +G Sbjct: 55 AKDELGNNVSASGWLSTHPVG 75
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_MASLA (Cytochrome b6-f complex iron-sulfur subunit OS=Mastigocladus laminosus GN=petC PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 5.373e-45 Identity = 75/107 (70.09%), Postives = 88/107 (82.24%), Query Frame = -1 Query: 337 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 657 +H GDR L +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+ G+V+RGPAPLSLAL HA +++ +V PWTETDFRTGE PWW Sbjct: 72 SHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDETGKVIRGPAPLSLALCHATVQDDNIVLTPWTETDFRTGEKPWW 178 The following BLAST results are available for this feature:
BLAST of CX296690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296690 ID=CX296690; Name=CX296690; organism=Citrus clementina; type=EST; length=708bpback to top |