CX296690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_PROM9 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9312) GN=petC PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.458e-42 Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH +IE+ V+ W+ETDFRT E PWWA Sbjct: 71 THQAGDRSLVQGLKGDPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178 HSP 2 Score: 21.557 bits (44), Expect = 3.458e-42 Identity = 8/22 (36.36%), Postives = 11/22 (50.00%), Query Frame = -2 Query: 642 TAKDAIGNDIIAADWLTRTALG 707 +AKD +GN + WL G Sbjct: 54 SAKDELGNPVTKTGWLATHQAG 75
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_PROM2 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9215) GN=petC PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 3.458e-42 Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH +IE+ V+ W+ETDFRT E PWWA Sbjct: 71 THQAGDRSLVQGLKGDPTYLIVNEGGGIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178 HSP 2 Score: 21.9422 bits (45), Expect = 3.458e-42 Identity = 9/22 (40.91%), Postives = 11/22 (50.00%), Query Frame = -2 Query: 642 TAKDAIGNDIIAADWLTRTALG 707 +AKD +GN I WL G Sbjct: 54 SAKDELGNPITKTGWLATHQAG 75
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_PROM0 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9301) GN=petC PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.506e-42 Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH +IE+ V+ W+ETDFRT E PWWA Sbjct: 71 THQAGDRSLVQGLKGDPTYLIVNEVGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178 HSP 2 Score: 21.9422 bits (45), Expect = 4.506e-42 Identity = 9/22 (40.91%), Postives = 11/22 (50.00%), Query Frame = -2 Query: 642 TAKDAIGNDIIAADWLTRTALG 707 +AKD +GN I WL G Sbjct: 54 SAKDELGNPITKTGWLATHQAG 75
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_PROM5 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9515) GN=petC PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 9.970e-42 Identity = 72/111 (64.86%), Postives = 89/111 (80.18%), Query Frame = -1 Query: 334 LANTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 666 LAN H GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH ++++ V+ W+ETDFRT E PWWA Sbjct: 69 LAN-HQAGDRSLVQGLKGDPTYLIVNSEGDIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDVDDDAVLVKQWSETDFRTNENPWWA 178 HSP 2 Score: 21.9422 bits (45), Expect = 9.970e-42 Identity = 8/22 (36.36%), Postives = 11/22 (50.00%), Query Frame = -2 Query: 642 TAKDAIGNDIIAADWLTRTALG 707 +AKD +GN + WL G Sbjct: 54 SAKDELGNPVTKTGWLANHQAG 75
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_PROMP (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=petC PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.693e-41 Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 +H GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH ++++ V+ W+ETDFRT E PWWA Sbjct: 71 SHQAGDRSLVQGLKGDPTYLIVNSEGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDVDDDAVLVKQWSETDFRTNENPWWA 178 HSP 2 Score: 21.557 bits (44), Expect = 1.693e-41 Identity = 8/22 (36.36%), Postives = 11/22 (50.00%), Query Frame = -2 Query: 642 TAKDAIGNDIIAADWLTRTALG 707 +AKD +GN + WL G Sbjct: 54 SAKDELGNPVTKTGWLASHQAG 75
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_BIGNA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Bigelowiella natans GN=petC PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.796e-40 Identity = 72/109 (66.06%), Postives = 83/109 (76.15%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKD-KTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 +H R L +G+KGDPTYL+V D TL SYG+NA+CTHLGCVVPW++A NKF CPCHGSQY G VVRGPAP L LAH +NGK++ PWTETDFRTGE PWWA Sbjct: 144 SHKKNARDLVQGIKGDPTYLIVNDDGSTLNSYGLNAICTHLGCVVPWDAASNKFKCPCHGSQYAPDGHVVRGPAPRPLQLAHVEDDNGKILLSPWTETDFRTGEKPWWA 252
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_SYNJA (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain JA-3-3Ab) GN=petC PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31 Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = -1 Query: 358 LANTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFR 666 L TH DR L +GLKGDPTY+V++ +A+YG+NAVCTHLGCVVPWN+ EN F CPCHGSQY G+V+RGPAP SL L A ++ V F PW DFR Sbjct: 69 LLATHAATDRVLAQGLKGDPTYIVIDNG-AVANYGLNAVCTHLGCVVPWNAGENLFKCPCHGSQYAANGKVIRGPAPRSLELVSATVDGDNVRFSPWQGPDFR 170
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_SYNJB (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. GN=petC PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.767e-31 Identity = 61/103 (59.22%), Postives = 72/103 (69.90%), Query Frame = -1 Query: 358 LANTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFR 666 L TH DR L +GLKGDPTY+V++ +A+YG+NAVCTHLGCVVPWN EN F CPCHGSQY G+V+RGPAP SL L A ++ V F PW DFR Sbjct: 69 LLATHAATDRVLAQGLKGDPTYIVIDNG-AVANYGLNAVCTHLGCVVPWNVGENLFKCPCHGSQYAANGKVIRGPAPRSLELVSATVDGDNVRFSPWQGPDFR 170
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_SYNY3 (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Synechocystis sp. (strain PCC 6803) GN=petC1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.420e-29 Identity = 55/104 (52.88%), Postives = 69/104 (66.35%), Query Frame = -1 Query: 337 PGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 648 PG R L GL GDPTYL+V++D +L S GI CTHLGC PWN + +F CPCHGS+Y+ G V RGPAPL L + + + ++ PWT+ D RTGE PWW Sbjct: 74 PGTRALVAGLAGDPTYLIVKEDGSLDSIGIVDSCTHLGCTFPWNGNDQEFQCPCHGSRYHPDGSVARGPAPLPLKIVQVAVVDDQIFISPWTDLDPRTGEKPWW 177
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIC_ANASP (Cytochrome b6-f complex iron-sulfur subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=petC3 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28 Identity = 54/104 (51.92%), Postives = 68/104 (65.38%), Query Frame = -1 Query: 337 PGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 648 P R L GL G+PTYL+V++D TL G+ CTHLGC PWN + +F CPCHGS+Y G VVRGPAPL L + + + ++ PWTETD RTG+ PWW Sbjct: 74 PQTRALVAGLAGEPTYLIVKEDHTLDRIGLVDNCTHLGCTFPWNPLDQQFQCPCHGSRYAPDGSVVRGPAPLPLKIVQVAVIDNSILISPWTETDPRTGKKPWW 177 The following BLAST results are available for this feature:
BLAST of CX296690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296690 ID=CX296690; Name=CX296690; organism=Citrus clementina; type=EST; length=708bpback to top |