CX296690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_GLOVI (Cytochrome b6-f complex iron-sulfur subunit OS=Gloeobacter violaceus GN=petC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.794e-28 Identity = 58/112 (51.79%), Postives = 73/112 (65.18%), Query Frame = -1 Query: 337 PGDRTLTEGLK---GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFR-----TGEAPWW 648 PG+ LT GL GD TY+V+ K +A++GINAVCTHLGCVVPW++ +F CPCHGS YN G + RGPAP LAL A + + KV+ PWTE DFR + P+W Sbjct: 73 PGEPVLTLGLDVNGGDATYIVINDQKEIANFGINAVCTHLGCVVPWDNGAKQFKCPCHGSVYNADGGLERGPAPQPLALVKATVSDDKVLIAPWTEQDFRCTDLWCNKDPYW 184
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIB_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC2 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 54/103 (52.43%), Postives = 64/103 (62.14%), Query Frame = -1 Query: 337 GDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 645 G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCHGS+Y+ QG V RGPA L L H +++ + W ETD RTGE PWW Sbjct: 75 GTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCHGSRYDAQGSVERGPANRPLKLVHVQVKDDYIWISSWQETDPRTGEKPWW 177
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIB_ANASP (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=petC2 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 54/103 (52.43%), Postives = 64/103 (62.14%), Query Frame = -1 Query: 337 GDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 645 G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCHGS+Y+ QG V RGPA L L +++ + PW ETD RTGE PWW Sbjct: 75 GTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCHGSRYDAQGSVERGPANRPLKLVQVQVKDDYIWISPWQETDPRTGEKPWW 177
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_CHLTE (Cytochrome b6-f complex iron-sulfur subunit OS=Chlorobium tepidum GN=petC PE=3 SV=4) HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = -1 Query: 388 DPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVV 612 D +VV +L + ++A+CTHLGC+V W+ A + CPCHG++Y G+++ GP PL L IE+GK+V Sbjct: 105 DDKVIVVNHGGSLTA--VSAICTHLGCLVHWDEAADMIACPCHGAKYTQDGKIISGPQPLPLKQYKVKIEDGKIV 177
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_CHLLT (Cytochrome b6-f complex iron-sulfur subunit OS=Chlorobium limicola f.sp. thiosulfatophilum GN=petC PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = -1 Query: 388 LVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVV 600 +VV K L + ++AVCTHLGC+V W A+N++ CPCHG++Y G ++ GP PL L A IE ++ Sbjct: 109 IVVNKGGALTA--VSAVCTHLGCLVNWVDADNQYFCPCHGAKYKLTGEIISGPQPLPLKQYKARIEGDSII 177 The following BLAST results are available for this feature:
BLAST of CX296690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296690 ID=CX296690; Name=CX296690; organism=Citrus clementina; type=EST; length=708bpback to top |