CX296693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_AGRT5 (Chaperone protein clpB OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=clpB PE=3 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 3.129e-46 Identity = 110/269 (40.89%), Postives = 153/269 (56.88%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL-----------------KAQISALVDKGKEMSKAETE------------AGD---------------------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+E+YE HHK+R +D ALV+AA LS +YI+DRFLPDKAIDL+DEA SR+R++ PEE EL++ + Q+ E+ + D LR E +L K ++ D K + +A E AG+ V VVT +I H+VS WTGIPV+K+ + ++LL+ME+ L K V+GQ EAV+A+S+A+RR+R GL++PNRPI SFIF GPTGVGK++ Sbjct: 347 TISILRGLKEKYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRIIQLKIEREALKQETDQSSVDRLRKLEDELADTEEKADALTARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGELTYGIIPGLEKELAAAEARDSSGAGSMVQEVVTPDNIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTE 615
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_PORGI (Chaperone protein clpB OS=Porphyromonas gingivalis GN=clpB PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.086e-46 Identity = 109/269 (40.52%), Postives = 156/269 (57.99%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA-------GELRDREMDLKAQISALVDKGKEM--------------SKAETEAGDVGPVV-----------TEV------------------------DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 +I IL+GL+E+YE HHK+R D+A+++A +LS++YI++RFLPDKAIDL+DEA +R+R+ LPEE E+ + ++Q+ E+ R D EK EL+++E KAQ D+ ++ +AE E GD G V TE+ DI IVS WTGIPV ++ E D+LL +E+ LHKRVIGQDEA++A++ A+RR+R GL++P RPI SFIF G TGVGK++ Sbjct: 344 SISILRGLKEKYENHHKVRIKDDAIIAAVKLSHRYITERFLPDKAIDLMDEAAARLRMEVDSLPEELDEISRRIKQLEIEREAIKRENDEEKVQFLDREIAELKEKEASEKAQWQNEKDRINQIQQLKIDIEELKFQADRAERE-GDYGRVAEIRYGLIKQKETEIDTIQQQLHELQRGGSMIKEEVEADDIADIVSRWTGIPVSRMLQSERDKLLHLEDELHKRVIGQDEAIRAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTE 611
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_PSESM (Chaperone protein clpB OS=Pseudomonas syringae pv. tomato GN=clpB PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.970e-46 Identity = 110/268 (41.04%), Postives = 155/268 (57.84%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRL--------------RHAQLPEEARELEKE-----LRQITKEKNEAVRGQ----DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HHK+ TD A+++AA+LS++YI+DR LPDKAIDLIDEA SR+R+ R QL EA+ L+KE ++++ K + E VR + D E+ E+ AQI +++ ++ +A GD+ + VTE +I +VS WTGIPV K+ E ++LL+ME LH RVIGQ+EAV A+S A+RR+R GL +PNRP SF+F GPTGVGK++ Sbjct: 346 TIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEIVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQMVDQHGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_CAUCR (Chaperone protein clpB OS=Caulobacter crescentus GN=clpB PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.103e-46 Identity = 106/266 (39.85%), Postives = 152/266 (57.14%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK-----------------------AQISALVDKGK--------------------------EMSKAETEAGDVGPVVTEV----DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 T+ IL+GL+E+YE+HH +R +D A+V+AA LS +YI+DRFLPDKAIDL+DEA SRVR++ PEE E+++ L Q+ E+ + D L + E+++ AQ +D+ + E AE EAGD + EV I +VS WTG+PVEK+ E ++LLKME+ L RV+GQDEA++A+S A+RRAR GL++P++PI SF+F GPTGVGK++ Sbjct: 346 TVSILRGLKEKYEVHHGVRISDSAIVAAATLSNRYIADRFLPDKAIDLVDEASSRVRMQIDSKPEELDEIDRRLVQLKIEREALSKETDAASKQRLENLEVEIDDLQFRSDEMTARWKAEKEKVGGAAQAREALDRLRADLANAQRAGDFARAGQIQYGEIPALERRLAEAEAGDTQALTPEVVDAEQIAAVVSRWTGVPVEKMLEGEREKLLKMEDELRGRVVGQDEALEAVSDAVRRARAGLQDPSKPIGSFLFLGPTGVGKTE 611
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 2.028e-45 Identity = 113/270 (41.85%), Postives = 156/270 (57.78%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV----------RGQDFEKAGELRDRE--------------------MDLKAQIS------ALVDKGKEMSKA---------------------ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+E+YE HHK+R +D ALV+AA LS +YI+DRFLPDKAIDL+DEA SR+R++ PEE E+++ + Q+ E+ EA+ R Q EK EL D E DLK Q+ A+ + E KA E + + VT + ++S WTGIPV+++ E ++LL+ME+ + KRV+GQ EAV+AIS+A+RRAR GL++PNRPI SFIF GPTGVGK++ Sbjct: 347 TISILRGLKEKYEQHHKVRVSDSALVAAAMLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEIDRRIMQLKIER-EALKVETDAASKDRLQRIEK--ELSDLEEESAELTAKWQAEKQKLGLAADLKRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAESQENKGSLLEETVTPDHVAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_BRUSU (Chaperone protein clpB OS=Brucella suis GN=clpB PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.459e-45 Identity = 113/270 (41.85%), Postives = 155/270 (57.41%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV----------RGQDFEKAGELRDRE--------------------MDLKAQIS------ALVDKGKEMSKA---------------------ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+E+YE HHK+R +D ALV+AA LS +YI+DRFLPDKAIDL+DEA SR+R+ PEE E+++ + Q+ E+ EA+ R Q EK EL D E DLK Q+ A+ + E KA E + + VT + ++S WTGIPV+++ E ++LL+ME+ + KRV+GQ EAV+AIS+A+RRAR GL++PNRPI SFIF GPTGVGK++ Sbjct: 347 TISILRGLKEKYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMHVDSKPEELDEIDRRIMQLKIER-EALKVETDAASKDRLQRIEK--ELSDLEEESAELTAKWQAEKQKLGLAADLKRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAESQENKGSLLEETVTPDHVAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_BACTN (Chaperone protein clpB OS=Bacteroides thetaiotaomicron GN=clpB PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.459e-45 Identity = 109/269 (40.52%), Postives = 154/269 (57.25%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKA-------GELRDREMDLKAQISA---LVDKGK-----------EMSKAETEAGDVGPV-----------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE HH +R D+A+++A +LS +YI+DRFLPDKAIDL+DEA +++R+ +PEE E+ ++++Q+ E+ R D K EL++ E KA+ + L+DK + E KAE E GD G V V DI +VS WTGIPV K+ E D+LL +E+ LH+RVIGQDEA++A++ A+RR+R GL++P RPI SFIF G TGVGK++ Sbjct: 344 TISILRGLKERYENHHHVRIKDDAIIAAVELSSRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIEREAIKRENDKPKLEIIGKELAELKEVEKSFKAKWQSEKTLMDKIQQNKVEIENLKFEAEKAERE-GDYGKVAEIRYGKLQALDKEIEDTQEKLRGMQGDKAMIKEEVDAEDIADVVSRWTGIPVSKMMQSEKDKLLHLEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTE 611
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNY3 (Chaperone protein clpB 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpB2 PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.459e-45 Identity = 111/274 (40.51%), Postives = 149/274 (54.38%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE-----------------------------LEKELR-------------------------------QITKEKNEAVRGQDFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH ++ D ALV+AA LS +YISDRFLPDKAIDL+DEA +++++ PEE E LEKEL Q+ E +A R D+ KA EL+ ++ DL+ Q+ AL + E + + V E DI I+S WTGIP+ K+ E ++LL +E+ LH RVIGQDEAV A++ AI+R+R GL +PNRP ASFIF GPTGVGK++ Sbjct: 348 TISILRGLKERYEVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDRKILQLEMERLSLQRENDSASKERLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVKETIDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEALETQLAEQQTSGKSL--LREEVLESDIAEIISKWTGIPISKLVESEKEKLLHLEDELHSRVIGQDEAVTAVAEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTE 619
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_THET8 (Chaperone protein clpB OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpB PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 4.518e-45 Identity = 105/267 (39.33%), Postives = 155/267 (58.05%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK------AQISALVDKGKEMSK----------------------------AETEAGDVGPVVTEV--------------------DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+E+YE+HH +R +D A+++AA LS++YI++R LPDKAIDLIDEA +R+R+ PEE LE++ Q+ E+ + +D + L+ E ++ A++ A ++ +E+ + AE G++ + EV DI IVS WTGIPV K+ E ++LL++EE LHKRV+GQDEA++A++ AIRRAR GLK+PNRPI SF+F GPTGVGK++ Sbjct: 337 TISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTE 603
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_THET2 (Chaperone protein clpB OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpB PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.518e-45 Identity = 105/267 (39.33%), Postives = 155/267 (58.05%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK------AQISALVDKGKEMSK----------------------------AETEAGDVGPVVTEV--------------------DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+E+YE+HH +R +D A+++AA LS++YI++R LPDKAIDLIDEA +R+R+ PEE LE++ Q+ E+ + +D + L+ E ++ A++ A ++ +E+ + AE G++ + EV DI IVS WTGIPV K+ E ++LL++EE LHKRV+GQDEA++A++ AIRRAR GLK+PNRPI SF+F GPTGVGK++ Sbjct: 337 TISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTE 603 The following BLAST results are available for this feature:
BLAST of CX296693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296693 ID=CX296693; Name=CX296693; organism=Citrus clementina; type=EST; length=648bpback to top |