CX296693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_PROMM (Chaperone protein clpB OS=Prochlorococcus marinus (strain MIT 9313) GN=clpB PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.901e-45 Identity = 110/273 (40.29%), Postives = 163/273 (59.71%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK------NEAVRGQDFEKA----GELRDREMDLKAQ----------ISALVDK-------------------------------GKEMSKAET------EAGDVGPV---VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH +R D ALV+AA LS +YI+DRFLPDKAIDL+DE+ +R+++ PEE E+++++ Q+ EK +++V + EK EL +++ L AQ +S+L ++ K++S+ ET EAGD + VTE DI +++ WTGIPV K+ E ++LL +E LH+RVIGQ++AV+A++ AI+R+R GL +PNRPIASF+F GPTGVGK++ Sbjct: 347 TISILRGLKERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLMDESAARLKMEITSKPEEIDEIDRKIVQLEMEKLSLGRESDSVSKERLEKLERELAELAEQQSALNAQWQQEKGAIDDLSSLKEEIERVQLQVEQAKRSYDLNKAAELEYGTLAGLQKQLSEKETALAQDGEAGDKSLLREEVTEDDIADVIAKWTGIPVAKLVQSEMEKLLGLEAELHQRVIGQEQAVQAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTE 619
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPE_LACLA (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. lactis GN=clpE PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.706e-45 Identity = 98/213 (46.01%), Postives = 137/213 (64.32%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+G++ RYE +H ++YTDEA+ +AA LS +YI DRFLPDKAIDL+DE+GS+ L + E ++ + + +KNEA + +DFEKA RD+ + K +E+ E ++ PV+TE DI+ IV T IPV + E +L+ + + L VIGQDEAV I++AIRR+RVGL PNRPI SF+F GPTGVGK++ Sbjct: 291 TITILRGIQARYEDYHHVKYTDEAIEAAAHLSNRYIQDRFLPDKAIDLLDESGSKKNLTLKFVDPE--DINRRIADAETKKNEATQAEDFEKAAHFRDQ-----------ITKLRELQNHEVSDDEI-PVITEKDIEQIVEQKTHIPVGDLKEKEQTQLINLADDLKAHVIGQDEAVDKIAKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTE 489
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_GLOVI (Chaperone protein clpB OS=Gloeobacter violaceus GN=clpB PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.706e-45 Identity = 113/275 (41.09%), Postives = 156/275 (56.73%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAG--------------------------------------SRVRLRH-----AQLPEEAREL-----------------EKELRQITKEKNEAVRGQDFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH +R +D ALV+AA LS++YISDRFLPDKAIDL+DEA SR RL A L EE R L ++E+ Q+ + +A R D +A EL+ ++ +L+ ++ A K++S+ +T + VTE DI I+S WTGIPV K+ E ++LL +E+ LHKRV+GQ+EAV+ +S AI+R+R GL +PNRPIASFIF GPTGVGK++ Sbjct: 349 TISILRGLKERYEVHHGVRISDSALVAAAVLSHRYISDRFLPDKAIDLMDEAAAKLKMEITSKPEALDEVDRKILQLEMERLSLAKESDAASRDRLERLEKELADLKEEQRSLNAQWQAEKDIIDQVQAVKEEIDQVNVQIQQAERDYDLNRAAELKYGKLSELQKRLDAA---DKQLSETQTSGRSLLREEVTEEDIAEIISKWTGIPVSKLVASEREKLLHLEDELHKRVVGQEEAVRIVSEAIQRSRAGLADPNRPIASFIFLGPTGVGKTE 620
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_PROFR (Chaperone protein clpB (Fragment) OS=Propionibacterium freudenreichii subsp. shermanii GN=clpB PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.315e-44 Identity = 110/270 (40.74%), Postives = 149/270 (55.19%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK-------------------------NEAVRG---------QDFEKAGELRDR-------------EMDLKAQISALVDKGKEMSKAETEAGD----------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 T+ IL+GLRERYE HHK+R TD ALV+AAQLS++YI+ R LPDKAIDL+DEA SR+R+ PEE L +++ ++T E+ E +RG + K GEL+ R + DL L + E++K EA V VT DI +VSAWTG+PV K+ ES++LL ME + KR++GQ AVKA+S A+RR+R G+ +PNRP SF+F GPTGVGK++ Sbjct: 347 TVAILRGLRERYEAHHKVRITDSALVAAAQLSHRYITGRQLPDKAIDLVDEAASRLRMEIDSSPEEIDTLRRQVDRLTMEQFAVEKEEDPGSKARLARINSDLADAKEQLRGLEARWAAEKEGLNKVGELKTRIDALRTEADKHTRDGDLAKASEILYGEIPELNKQLDEASAAEEDSQGKSMVSEEVTSDDIAEVVSAWTGVPVGKMLEGESEKLLDMENRIGKRLVGQQAAVKAVSDAVRRSRAGISDPNRPTGSFMFLGPTGVGKTE 616
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3) HSP 1 Score: 179.104 bits (453), Expect = 1.717e-44 Identity = 110/281 (39.15%), Postives = 151/281 (53.74%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE-----------------------------LEKELRQITKEKN-------------------------------EAVRGQDFEKAGELRDREM--------DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH +R +D ALV+AA LS +YISDRFLPDKAIDL+DE+ +R+++ PEE E LEKEL + +E+ +A R D KA EL+ ++ +++ ++ GK + + E VTEVDI I+S WTGIPV K+ E +LL ++E LH+RVIGQ+EAV A++ AI+R+R GL +P RPIASFIF GPTGVGK++ Sbjct: 348 TISILRGLKERYEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDESAARLKMEITSKPEELDEIDRKILQLEMERLSLQKESDLASQERLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSVKEEIDQVNLLIQQAERDYDLNKAAELKYGKLTELQRKLNEMEGGLATTHTSGKSLLREE---------VTEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSRAGLSDPKRPIASFIFLGPTGVGKTE 619
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_HAEIN (Chaperone protein clpB OS=Haemophilus influenzae GN=clpB PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.242e-44 Identity = 112/268 (41.79%), Postives = 153/268 (57.09%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT-------KEKNEAVRGQDFEKAGELRDREMDL----------KAQISALVDKGKEMSKAETE------AGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYEIHH + TD A+V+AA LS++YISDR LPDKAIDLIDEA S +R+ PE LE+ + Q+ KE++EA R + EL ++E + KA +S +E+ A+TE AGD+ + VT+ +I ++S TGIPV K+ E ++LL+ME+ LHKRVIGQ+EAV A++ AIRR+R GL +PNRPI SF+F GPTGVGK++ Sbjct: 346 TIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPDLEKQLEQAETSEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_CLOTE (Chaperone protein clpB OS=Clostridium tetani GN=clpB PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.242e-44 Identity = 108/271 (39.85%), Postives = 151/271 (55.72%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK------AQISALVDKGKE------------------MSKAETEAGDVGPV----------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI I++GL+ER+EIHH +R D A+V+AA+LS +YI+DR+LPDKAIDLIDEAG+ +R LP E +++++ Q+ EK + +D L D E +L +++A +K KE + KAE E D+ V VTE +I I+S WTGIPV K+ E D+LL++E+ L RVIGQDEAV+A+S A+ RAR G+K+P +PI SFIF GPTGVGK++ Sbjct: 350 TISIIRGLKERFEIHHGIRIHDSAIVAAAKLSQRYITDRYLPDKAIDLIDEAGAMIRTEIDSLPTELDSIKRKIFQMEIEKEALAKEKDSRSKERLEDLEKELSNLKEKDKEMTAKYEKEKEQIINMRNLKQKLDEVKGQLEKAEREY-DLNKVAELKYGIIPGIKSQIEEKEILIKENSQGNMLKEEVTENEISKIISHWTGIPVTKLIEGEKDKLLRLEDELKSRVIGQDEAVEAVSNAVLRARAGMKDPQKPIGSFIFLGPTGVGKTE 619
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_SALTY (Chaperone protein clpB OS=Salmonella typhimurium GN=clpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.928e-44 Identity = 107/268 (39.93%), Postives = 156/268 (58.21%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD--FEKAGELRDREMDLKA-QISALVDK---------GKEMSKAETE-----------AGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YI+DR LPDKAIDLIDEA S +R++ PEE L++ + Q+ E+ ++ D +K ++ + E+D K Q S L ++ G + KAE E GD+ + VT+ +I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV+A+S AIRR+R GL +PNRPI SF+F GPTGVGK++ Sbjct: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_SALTI (Chaperone protein clpB OS=Salmonella typhi GN=clpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.928e-44 Identity = 107/268 (39.93%), Postives = 156/268 (58.21%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD--FEKAGELRDREMDLKA-QISALVDK---------GKEMSKAETE-----------AGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YI+DR LPDKAIDLIDEA S +R++ PEE L++ + Q+ E+ ++ D +K ++ + E+D K Q S L ++ G + KAE E GD+ + VT+ +I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV+A+S AIRR+R GL +PNRPI SF+F GPTGVGK++ Sbjct: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_BDEBA (Chaperone protein clpB OS=Bdellovibrio bacteriovorus GN=clpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.928e-44 Identity = 107/273 (39.19%), Postives = 158/273 (57.88%), Query Frame = 2 Query: 11 IQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT-------KEKNEAVRGQ----------------------DFEKAG------------ELR------DREMDL--------------KAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 I IL+GL+E+YE+HH +R TD ALVSA +LS++YI++RFLPDKAIDLIDEA S++ + +PEE ++E+EL Q+ KEK+E+ R + +FEK G +L+ +RE DL + ++ AL ++ KE +K+ +E + V D+ +V+ WTGIPV K+ ES +LL ME++L RV+GQD A+ ++ AIRRAR + +PNRPI +F+F GPTGVGK++ Sbjct: 343 ITILRGLKEKYEVHHGIRITDAALVSAVKLSHRYITNRFLPDKAIDLIDEAASKLGIETRSVPEEVDKIERELMQLRIEKEALKKEKDESARERLAVIDKEITELNAKNQLLREQWEFEKGGIEGIKKLKADIEDLKVAVAKAEREGDLGKAAELKYGKLPEAEKKLKALEERSKEGAKSSSENRMLKEEVGPEDVAEVVAKWTGIPVSKMLESESQKLLHMEDSLKHRVVGQDHALTIVADAIRRARAEISDPNRPIGTFMFLGPTGVGKTE 615 The following BLAST results are available for this feature:
BLAST of CX296693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296693 ID=CX296693; Name=CX296693; organism=Citrus clementina; type=EST; length=648bpback to top |