CX296693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_ECO57 (Chaperone protein clpB OS=Escherichia coli O157:H7 GN=clpB PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.524e-44 Identity = 105/270 (38.89%), Postives = 153/270 (56.67%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD--------------FEKAGELRDREMDLKAQISALVDKGKEMSKAETE-----------AGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YI+DR LPDKAIDLIDEA S +R++ PEE L++ + Q+ E+ ++ D +K + + E + KA+ ++L G + KAE E GD+ + VT+ +I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV A+S AIRR+R GL +PNRPI SF+F GPTGVGK++ Sbjct: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASL--SGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_COREF (Chaperone protein clpB OS=Corynebacterium efficiens GN=clpB PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.524e-44 Identity = 110/269 (40.89%), Postives = 151/269 (56.13%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI-------TKEKNEAVR----------GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA------GDVGPV---------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 T+ IL+GL+ERYE+HH +R D ALV+AA+LS++YI+ RFLPDKAIDL+DEA SR+R+ P+E ELE+ +R++ TKE + A R + EK EL+ R + KA I + +E+ +E+ GD G V VT I +VSAWTGIP K+ E+++LL ME L KRV+GQ EAV A+S A+RR+R G+ +PNRP SF+F GPTGVGK++ Sbjct: 348 TVGILRGLKERYEVHHGVRIQDSALVAAAELSHRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEIEEVALTKETDVASRERLERLRSELADEREKLSELKARWQNEKAVIDDVRKFKEELEALRSESDIAEREGDYGRVAELRYGRIPELEKKIAEAEEKIGGADNSMLTEEVTPEVIAEVVSAWTGIPAGKMMQGETEKLLNMERFLGKRVVGQHEAVTAVSDAVRRSRAGVADPNRPTGSFLFLGPTGVGKTE 616
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.113e-43 Identity = 107/279 (38.35%), Postives = 157/279 (56.27%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI---------------------TKEKNEAVR-------GQDFEKAGE-------------LRDREMDLKAQI-----------SALVDKG-----------KEMSKAETEAGD---VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+E+YE+HH ++ TD ALV+AA LS++YI DRFLPDKAIDL+DEA +R+++ P E ++++ L Q+ +KE+ E ++ GQ E +G+ L+++E +L+ Q+ +A + G KE E + + VTE DI IV+ WTGIP+ ++ E +LL++E LH+RVIGQ EAV A+S AIRRAR G+K+P+RPI SF+F GPTGVGK++ Sbjct: 350 TISILRGLKEKYEVHHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITSKPVELEDIDRRLMQLQMEKLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQMLEEINTLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNTLLREQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTE 628
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB2_STRAW (Chaperone protein clpB 2 OS=Streptomyces avermitilis GN=clpB2 PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.453e-43 Identity = 112/274 (40.88%), Postives = 154/274 (56.20%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA--------------------------------------GSRVRL----------------RHAQLPEE------ARELEKELRQITKEKNEAVRGQDFEKAGELR-DREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GLRER E+ H ++ D ALVSAA LS++YI+DRFLPDKAIDL+DEA S+ RL +HAQ E +EL +EL Q+ E EA R D +A ELR R DL+ +++A + ++++ + E + VVTE +I IV+AWTGIPV ++ E ++LL+++E L +RVIGQDEAVK ++ AI RAR G+++P RPI SFIF GPTGVGK++ Sbjct: 351 TISILRGLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDEITRRVTRLEIEEAALSKESDPASKTRLEELRRELADLRGEADAKHAQWEAERQAIRRVQELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDLERRLAA---EEEQLAAKQGENRLLREVVTEEEIAEIVAAWTGIPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVTDAIIRARSGIRDPRRPIGSFIFLGPTGVGKTE 621
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFT (Chaperone protein clpB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpB PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.898e-43 Identity = 110/268 (41.04%), Postives = 150/268 (55.97%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT-------KEKNEAVRGQ--DFEKAGELRDREM-DLKA---------QISALVDKGKEMSKAETEAGD------------------------------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+E+Y +HH + TD A+V+AA LS +YI+DR LPDKAIDL+DEA SR+R+ PEE LE+ L Q+ KEK+EA + + D E+ E+ DRE DL+ Q + + + E +K + EA V VT +I +VS WTGIPV K+ E D+LL+ME L +RV+GQDEA+K +S A+RR+R GL +PNRP SF+F GPTGVGK++ Sbjct: 346 TIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLVDLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLVAASQAEQHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDKLLRMEADLGRRVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_DEIRA (Chaperone protein clpB OS=Deinococcus radiodurans GN=clpB PE=3 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 1.898e-43 Identity = 104/267 (38.95%), Postives = 147/267 (55.06%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA-----------------QISALVDKGKEMSKAET-----------------EAGDVGPV--------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+G++ERY++HH + TD ALV+AA LS +YI+DR LPDKAIDLIDE+ +R+R+ PE +L + Q+ E+ R +D + L D E LK +++AL +K +++ T E G++ + VTE DI +VS WTGIPV K+ E ++LL +EE LH RVIGQD A+ ++S AIRRAR GL +PNRP+ SF+F GP+GVGK++ Sbjct: 337 TISILRGIKERYQVHHNVEITDPALVAAATLSNRYITDRQLPDKAIDLIDESAARLRMALESSPERIDQLSRRKLQLEIEREALKREKDVDSQNRLLDIENQLKTLTDELNEVRSRWEAERGEVAALREKREKLDAVRTQIEKARRDYDLEEAARLEYGELPALEKDVQDLEKKLKSAEFAHMEVTEEDIAAVVSRWTGIPVSKLMEGEREKLLHLEEQLHGRVIGQDRAIVSVSDAIRRARAGLNDPNRPLGSFMFLGPSGVGKTE 603
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB2_THEEB (Chaperone protein clpB 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB2 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.898e-43 Identity = 107/280 (38.21%), Postives = 155/280 (55.36%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKE------------------------------------KNEAVRG------QDFEKAGELRDREMDLKAQI-----------SALVDKGK-EMSKAETEAGDVGPV-------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL++RYEIHH ++ TD ALV+AA LS +YISDR+LPDKAIDL+DEA +++++ P E LE+ LRQ+ E + +A++ + E+ L++ E +K QI +A + G+ E + E EA + + VTE DI IV+ WTGIP++K+ E +LL++E+ LH+RVIGQ +AV A++ AIRRAR G+K+P RPI SF+F GPTGVGK++ Sbjct: 348 TISILRGLKDRYEIHHNVKITDSALVAAAMLSDRYISDRYLPDKAIDLVDEAAAKLKMEITTKPAELEALERRLRQLEMERLSLKQEESLPLSQAPLQATRDRLQRIEAEIAQLQPRQQAMQARWQAEKELLERINSLKEEEDQVKLQIEQAERDYNLNKAAQLKYGRLETLQRELEATEAQLLELQAAGGTFLRDQVTEADIAEIVAKWTGIPLQKLMASERQKLLQLEQVLHQRVIGQSDAVAAVAAAIRRARAGMKDPARPIGSFLFMGPTGVGKTE 627
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_BLOFL (Chaperone protein clpB OS=Blochmannia floridanus GN=clpB PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.479e-43 Identity = 106/268 (39.55%), Postives = 149/268 (55.60%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPE--------------EARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD---------KGKEMSKAETEAGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH + TD A+V+AA LS +YISDR LPDKAIDLIDEA S +R++ PE E + L+KE +++K++ E + + +K E E + K + S+L D K K + GD+ + V+EV+I ++S WTGIP+ ++ +E ++LL ME LH+ VIGQDEAV+ IS AIRR+R GL +P RPI SF+F GPTGVGK++ Sbjct: 348 TIAILRGLKERYELHHNVHITDPAIVAAATLSNRYISDRQLPDKAIDLIDEAASSIRIQIDSKPEDLDRLDRRIIQLKLECQALKKESDELSKKRLEILSMELSQKEQEYSVLESEWKRERSSLFDIQNIKSDLEKAKTILDQSRRIGDLAQMSELQYGRIPELEKKLFNAIQSSNKKMRLLRNYVSEVEIAEVLSKWTGIPISRILANEKNKLLNMETILHQLVIGQDEAVRVISNAIRRSRSGLSDPKRPIGSFMFLGPTGVGKTE 615
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_AQUAE (Chaperone protein clpB OS=Aquifex aeolicus GN=clpB PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.479e-43 Identity = 100/256 (39.06%), Postives = 152/256 (59.38%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL--------------KAQISALVDKGKEMSKAETEAGDVGP-----------------------------VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI+ILKGLR R E HK++ +DEA+ +A +L+ +Y++ R LPDKAID +D+A +R +L+ P E +E+E++++ + ++ EA D+EK +L+ + L +A+I+ L K +E+ + EA + G VVT D+ +VS WTGIPV ++ +E +LLK+E+ LHKRV+ Q+ AVKA++ AIRRAR GLK+P RPIASF+F GPTGVGK++ Sbjct: 479 TIEILKGLRPRLEQFHKVKISDEAIEAAVKLTKRYVTFRRLPDKAIDALDQAAARKKLKVIGTPPEIQEIERKIKALEEQIIEANLKGDYEKEAQLKIEKAKLEKEKQELLGKVGGVEAKIAELKKKIEELDEKIKEAAEKGDYEKEAELKIEKAKLEKELKKLEQEKSKELVVTWDDVAEVVSEWTGIPVSRLKEEEMQKLLKLEDELHKRVVDQEHAVKAVAEAIRRARAGLKDPKRPIASFLFLGPTGVGKTE 734
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_XANAC (Chaperone protein clpB OS=Xanthomonas axonopodis pv. citri GN=clpB PE=3 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.238e-43 Identity = 107/268 (39.93%), Postives = 145/268 (54.10%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL--------------KAQISALVDKGK-----EMSKAETEAGD------------------------------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERY +HH + TD A+V+AA LS +YI+DR LPDKAIDL+DEA SR+R+ PEE LE+ L Q+ ++ + +D L D E D+ K++ +AL K E +K E EA V VT +I +VS WTGIPV K+ E D+LL+ME+ LH RV+GQ+EA+K +S A+RR+R GL +PNRP SF+F GPTGVGK++ Sbjct: 346 TIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613 The following BLAST results are available for this feature:
BLAST of CX296693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296693 ID=CX296693; Name=CX296693; organism=Citrus clementina; type=EST; length=648bpback to top |