CX296693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.607e-42 Identity = 108/272 (39.71%), Postives = 153/272 (56.25%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR-GQD---FEKAGELRD-----------------REMDLKAQISAL----VDKGKEMSKAETEA----------GDVGPVVTEVD------------------------IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+E+YE +H +R D A+++AA LS +YI+DRFLPDKAIDLIDEA SR+R+ +P E E+E+ + Q+ EK +R QD E+ +L D RE D+ ++S+L +K +E KAE E G++ + E+ + IVS WTGIPV ++ E+D+L+ ME+ L RV+GQDEA+ ++ AIRRAR GL +PNRPI SF+F GPTGVGK++ Sbjct: 348 TIAILRGLKEKYENYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEVERRIIQLEIEKQALLRESQDPHSLERLKKLADELEELKAKSAELKGHWQREKDIIGRVSSLRQRLEEKREEAKKAEREGNLARTAEIRYGEIPAIEKEIADRSAELEDIRKEGKMLPEEVDGELVAEIVSRWTGIPVSRMMEGEADKLVHMEDRLITRVVGQDEALVLVANAIRRARSGLSDPNRPIGSFLFLGPTGVGKTE 619
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_CHRVO (Chaperone protein clpB OS=Chromobacterium violaceum GN=clpB PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.607e-42 Identity = 112/272 (41.18%), Postives = 151/272 (55.51%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ-------ITKEKNEA-------VRGQDFEKAGELRD-------------------REMD-LKAQISALVDKGKEMSKAETE----------------AGDVGPV---------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+E+YEIHH + TD A+V+AA+LS +YI+DRFLPDKAIDLIDEA SR+++ PE +L++ L Q + KE +EA + + E + E D E+D LK + L KG AE + AGD G V +I +VS TGIPV K+ T E ++LLKME+ LH+RV+GQDEAV A++ AIRR+R GL +PN+P SF+F GPTGVGK++ Sbjct: 346 TIAILRGLQEKYEIHHGVDITDPAIVAAAELSQRYITDRFLPDKAIDLIDEAASRIKMELDSKPEAMDKLDRRLIQLKIEREAVNKESDEASQKRLKLIEDEIAELSREYADLEEIWKAEKAAQQGSQSIKEEIDRLKVDMEELKRKGDWQKLAELQYGKLPQLEARLKEAESAGDKGEAKPNRLLRTQVGAEEIAEVVSRATGIPVSKMLTGEREKLLKMEDVLHQRVVGQDEAVSAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_HAEDU (Chaperone protein clpB OS=Haemophilus ducreyi GN=clpB PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.099e-42 Identity = 115/270 (42.59%), Postives = 155/270 (57.41%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT-------KEKNEAVRGQ----DFE---KAGELRDREMDLKAQISALV----------------------DKGKEMS------------------KAETEAGD---VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYEIHH ++ TD A+V+AA LS++YISDR LPDKAIDLIDEA S +R+ PE +LE+ + Q+ KEK+EA R + D E KA E E KA+ SAL+ D ++MS K E E D + VTE +I ++S TGIP+ K+ E ++LL+ME+ LH RVIGQ+EAV+A++ AI R+R GL +PN+PI SF+F GPTGVGK++ Sbjct: 344 TIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEKDEASRQRLAKLDEEMTAKAQEYSALEEVWKAEKSALLGTQHLKTELENARIAMDQAKRADNFEKMSELQYGTIPALEKQLQDAIKREEENNDHHLLRTKVTEEEIAEVLSKATGIPITKMMEGEKEKLLRMEQVLHSRVIGQNEAVEAVANAILRSRAGLADPNKPIGSFLFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_CORGL (Chaperone protein clpB OS=Corynebacterium glutamicum GN=clpB PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.580e-42 Identity = 106/268 (39.55%), Postives = 150/268 (55.97%), Query Frame = 2 Query: 11 IQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI--------------TKEKNEAVRGQ---DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA------GDVGPV---------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 I IL+GL+ERYE+HH +R D ALV+AA+LS +YI+ RFLPDKAIDL+DEA SR+R+ P+E ELE+ +R++ +KE+ E +R + + EK EL+ R + K I + + +E+ +E+ G+ G V VT I +VSAWTGIP K+ E+++LL ME L RV+GQ EAV A+S A+RR+R G+ +PNRP SF+F GPTGVGK++ Sbjct: 349 IGILRGLKERYEVHHGVRIQDSALVAAAELSNRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEIEEMALSKESDAASKERLEKLRSELADEREKLSELKARWQNEKTAIDDVREMKEELEALRSESDIAERDGNYGRVAELRYGRIPELEKQIEDAESKVEVNENAMLTEEVTPDTIADVVSAWTGIPAGKMMQGETEKLLNMERVLGNRVVGQLEAVTAVSDAVRRSRAGVADPNRPTGSFLFLGPTGVGKTE 616
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB1_STRAW (Chaperone protein clpB 1 OS=Streptomyces avermitilis GN=clpB1 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.580e-42 Identity = 108/270 (40.00%), Postives = 149/270 (55.19%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKE-------------------------LRQITKEKNEAVRG---------QDFEKAGELRDREMDLKAQ--------------------ISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ RYE HHK++ D ALV+AA LS +YI+ RFLPDKAIDL+DEA SR+R+ P E EL+++ LR+ +K E +RG Q + GEL+++ +L+ Q I AL +E S+AE EA V EV DI +V +WTGIP ++ E+ +LL+MEE L R+IGQ EAV+A+S A+RR R G+ +P+RP SF+F GPTGVGK++ Sbjct: 348 TIAILRGLKGRYEAHHKVQIADSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPVEIDELQRQVDRLKMEELAIGKETDAASRERLEKLRRDLADKEEELRGLTARWEKEKQSLNRVGELKEKLDELRGQAERAQRDGDFDTASKLLYGEIPALERDLEEASEAEEEAARDTMVKEEVGPDDIADVVGSWTGIPAGRLLEGETQKLLRMEEELGHRLIGQSEAVQAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTE 617
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_LACLM (Chaperone protein clpB OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpB PE=2 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42 Identity = 107/273 (39.19%), Postives = 147/273 (53.85%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI--------------TKEKNEAVRGQDFEKAGELRDREMDLKAQISA-------LVDKGKEMSKAETEAGD---------------------------------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ER+EIHH + D ALV+AA LS +YI+DRFLPDKAIDLIDEA + +R+ LP E + + L Q+ +K++ E +RG+ ELR+ LKAQ A + +K E+ A E + V VTE I +V TGIP+ K+ E ++LL + ETLH+RV+GQDEAV+A+S AI RAR G+++PNRP+ SF+F GPTGVGK++ Sbjct: 348 TISILRGLKERFEIHHGVTIHDNALVAAATLSNRYITDRFLPDKAIDLIDEASATIRVEMNSLPTELDQANRRLMQLEIEEAALKKERDDASKKRLEIIRGE----IAELREENNQLKAQWEAEKKEVGNISEKRNELEHARHELEEAQNEGNLEKAAALRYGKIPEIEKELKAIEEKAKSDDLSLVQESVTEEQIAEVVGRMTGIPITKLVEGEREKLLHLPETLHQRVVGQDEAVEAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTE 616
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_WOLPM (Chaperone protein clpB OS=Wolbachia pipientis wMel GN=clpB PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42 Identity = 104/265 (39.25%), Postives = 153/265 (57.74%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT------KEKNEAVRGQDFEKAGE----LRDREMDL-------KAQISALVDKGKEMSKAETE------AGDVGPV-----------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH +R TD A+++AA LS +YI+DRFLPDKAIDLIDEA SRVR+ PE ELE+++ Q+ K++++ Q +K E L + DL K +I+ + + +++ A E +G++G VT DI +IVS WTGIPV+ + E ++LL ME + +RVIGQ +A++AIS A+RR+R G+++ N+P SF+F GPTGVGK++ Sbjct: 348 TISILRGLKERYEVHHGIRITDGAIIAAATLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPEVIDELERKVIQLKIEAEALKKESDENSKQRLKKINEEIENLNSKFADLNSKWQMEKNKIARIQETAEKLDNARKELELVQRSGNLGRAGELMYGVIPQLENELKNQEKVTDSFLKKEVTGDDIANIVSKWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRSRSGVQDTNKPFGSFLFLGPTGVGKTE 612
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVY (Chaperone protein clpB OS=Vibrio vulnificus (strain YJ016) GN=clpB PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42 Identity = 105/270 (38.89%), Postives = 149/270 (55.19%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE----------------------KELRQITKEKNEAVRGQDFEKAGELRDRE---MDLKAQISALVDKGKEMSKAETEAGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH + TD A+V+AA LS++Y+SDR LPDKAIDLIDEA S +R++ PE +LE K LR + +E NE R +F + E+ + E + I A +++ + + AGD+ + VT+ +I ++S TGIPV K+ E ++LL+MEE LHKRVIGQ EAV+ ++ AIRR+R GL +PN+PI SF+F GPTGVGK++ Sbjct: 346 TIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSLNEELNEKER--EFAELEEIWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAEMQEMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVU (Chaperone protein clpB OS=Vibrio vulnificus GN=clpB PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42 Identity = 105/270 (38.89%), Postives = 149/270 (55.19%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE----------------------KELRQITKEKNEAVRGQDFEKAGELRDRE---MDLKAQISALVDKGKEMSKAETEAGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 TI IL+GL+ERYE+HH + TD A+V+AA LS++Y+SDR LPDKAIDLIDEA S +R++ PE +LE K LR + +E NE R +F + E+ + E + I A +++ + + AGD+ + VT+ +I ++S TGIPV K+ E ++LL+MEE LHKRVIGQ EAV+ ++ AIRR+R GL +PN+PI SF+F GPTGVGK++ Sbjct: 346 TIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSLNEELNEKER--EFAELEEIWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAEMQEMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613
BLAST of CX296693 vs. ExPASy Swiss-Prot
Match: CLPB_VIBPA (Chaperone protein clpB OS=Vibrio parahaemolyticus GN=clpB PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42 Identity = 105/268 (39.18%), Postives = 149/268 (55.60%), Query Frame = 2 Query: 8 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI-------TKEKNEAVRGQDFEKAGELRDREMDL----------KAQISALVDKGKEMSKAETE------AGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSD 646 T+ IL+GL+ERYE+HH + TD A+V+AA LS++YISDR LPDKAIDLIDEA S +RL+ PE +LE+++ Q+ + E +EA + EL ++E + KA +S E+ +A + AGD+ + VT+ +I ++S TGIPV K+ E ++LL+ME+ LH RV+GQ EAV +S AIRR+R GL +PNRPI SF+F GPTGVGK++ Sbjct: 346 TVAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLQALNDELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHNRVVGQSEAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613 The following BLAST results are available for this feature:
BLAST of CX296693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296693 ID=CX296693; Name=CX296693; organism=Citrus clementina; type=EST; length=648bpback to top |