CX296694

Overview
NameCX296694
Unique NameCX296694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.590e-29
Identity = 59/118 (50.00%), Postives = 92/118 (77.97%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG KNKITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 1.590e-29
Identity = 59/118 (50.00%), Postives = 92/118 (77.97%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG KNKITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  519 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.590e-29
Identity = 59/118 (50.00%), Postives = 92/118 (77.97%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG KNKITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.590e-29
Identity = 59/118 (50.00%), Postives = 92/118 (77.97%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG KNKITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.590e-29
Identity = 59/118 (50.00%), Postives = 92/118 (77.97%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG KNKITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  519 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.077e-29
Identity = 59/118 (50.00%), Postives = 91/118 (77.12%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG KNKITITND+ RL+ +EIE+MV +AEK+  ED+  K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKRLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.296e-28
Identity = 55/119 (46.22%), Postives = 94/119 (78.99%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG K KI ITND+ RL+ ++I++M+++AEK+  ED++ K++VE++N LE+YAY+++N + D +K+G+KL   +K K+E AID++I+WL+ N  A+ +E++ + K+LE+I  P+IAK+YQ
Sbjct:  518 TGNKEKIVITNDQNRLTPEDIDRMIRDAEKFADEDKKLKERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLESAIDESIKWLEQNPDADPEEYKKQKKDLEAIVQPVIAKLYQ 636          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.999e-28
Identity = 59/118 (50.00%), Postives = 85/118 (72.03%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+   ITI NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++N LE+Y +N++  V+    G KLD ADK  + D  ++ I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q
Sbjct:  493 TGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQ 609          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.999e-28
Identity = 59/118 (50.00%), Postives = 85/118 (72.03%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+   ITI NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++N LE+Y +N++  V+    G KLD ADK  + D  ++ I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q
Sbjct:  493 TGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQ 609          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.999e-28
Identity = 59/118 (50.00%), Postives = 85/118 (72.03%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+   ITI NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++N LE+Y +N++  V+    G KLD ADK  + D  ++ I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q
Sbjct:  493 TGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQ 609          
The following BLAST results are available for this feature:
BLAST of CX296694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
GRP78_PONAB1.590e-2950.0078 kDa glucose-regulated protein OS=Pongo abelii G... [more]
GRP78_MOUSE1.590e-2950.0078 kDa glucose-regulated protein OS=Mus musculus G... [more]
GRP78_MESAU1.590e-2950.0078 kDa glucose-regulated protein OS=Mesocricetus a... [more]
GRP78_HUMAN1.590e-2950.0078 kDa glucose-regulated protein OS=Homo sapiens G... [more]
GRP78_BOVIN1.590e-2950.0078 kDa glucose-regulated protein OS=Bos taurus GN=... [more]
GRP78_SPETR2.077e-2950.0078 kDa glucose-regulated protein OS=Spermophilus t... [more]
HSP7C_DROME2.296e-2846.22Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]
HSP75_DROME2.999e-2850.00Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME2.999e-2850.00Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME2.999e-2850.00Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionC05801G06SK FerrChloL1 Citrus clementina cDNA clone C05801G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296694 ID=CX296694; Name=CX296694; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTTTTTTAGGGACCGAAAAATATTCATTATATAAATT
GGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTA
ATATTCCTCCTAAGGCTAAAACAACATAAGATAAAAACCAAACGTCCAGT
TTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAACAAAATAAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGGGGCACTGCCACCAG
CTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAAATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGGGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGGATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCGT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTATCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
CGTT
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