CX296694

Overview
NameCX296694
Unique NameCX296694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.999e-28
Identity = 59/118 (50.00%), Postives = 85/118 (72.03%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+   ITI NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++N LE+Y +N++  V+    G KLD ADK  + D  ++ I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q
Sbjct:  493 TGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQ 609          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.917e-28
Identity = 57/117 (48.72%), Postives = 82/117 (70.09%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG+  KITITNDKGRLS++EIE+MV EAEKYK EDE+  K++ AKN LE+YAY+++    +++   K++ + ++    A D  I WLD NQ A A+E++DK KELE   N ++  +Y
Sbjct:  493 TGKSEKITITNDKGRLSQEEIERMVSEAEKYKEEDEKEAKRIAAKNGLESYAYSLKQTTSEKQFEEKVEASKREAFTKACDDTIAWLDENQTATAEEYDDKRKELEQAGNEVLKDLY 609          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP73_PLAFA (Heat shock 70 kDa protein PPF203 (Fragment) OS=Plasmodium falciparum PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.726e-28
Identity = 53/106 (50.00%), Postives = 80/106 (75.47%), Query Frame = -2
Query:  336 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELE 653
            TG++N+ITITNDKGRLSKD+I++MV +AEKYK EDE++K ++EA+N LENY YN++N ++DE + +K+   D +K    +   + WL+ NQ AE +E+ +K K+ E
Sbjct:   95 TGKQNQITITNDKGRLSKDDIDRMVNDAEKYKEEDEQNKNRIEARNNLENYCYNVKNTLQDENLKTKIPKDDSEKCMKTVKSVLDWLEKNQTAETEEYNEKEKDTE 200          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 8.726e-28
Identity = 55/117 (47.01%), Postives = 84/117 (71.79%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG+  KITI NDKGRLS ++IE+M+++AE++  ED++  ++ +AKN LE+Y YN+RN   + ++  KL+ ADK+ +E  + + I+WLDSN  A  DE +DK KE+E   NPI+ K+Y
Sbjct:  493 TGKSEKITIRNDKGRLSSEQIEEMLKQAEQFAEEDKQALERTQAKNGLESYIYNVRNTTNEPQLKDKLEAADKEALEKIVKEGIEWLDSNTTASTDELKDKQKEIEEQVNPIMTKIY 609          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: MAG29_DERFA (Allergen MAG29 (Fragment) OS=Dermatophagoides farinae GN=MAG29 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.140e-27
Identity = 55/101 (54.46%), Postives = 77/101 (76.24%), Query Frame = -2
Query:  300 KDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 602
            KD+IE+MV+EAE YK ED++ + ++ AKN LE YA+ M+  + +E I SK+   D+KKI D +D+ ++WLD+N LAE DEFE + KELES+CNPII K+YQ
Sbjct:    1 KDDIERMVKEAESYKEEDDKQRDRIAAKNSLEGYAFQMKATLDEEAIKSKVSEEDRKKILDKVDEVLKWLDANALAEKDEFEHQRKELESVCNPIITKLYQ 101          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.140e-27
Identity = 58/118 (49.15%), Postives = 84/118 (71.19%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+   ITI NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++N LE+Y +N++  V+    G KLD ADK  + D  +  I+WLDSN  AE +EF+ K++EL   C+PI+ KM+Q
Sbjct:  493 TGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQAVEQAPAG-KLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKLEELTRHCSPIMTKMHQ 609          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.140e-27
Identity = 58/118 (49.15%), Postives = 84/118 (71.19%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+   ITI NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++N LE+Y +N++  V+    G KLD ADK  + D  +  I+WLDSN  AE +EF+ K++EL   C+PI+ KM+Q
Sbjct:  493 TGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQAVEQAPAG-KLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKLEELTRHCSPIMTKMHQ 609          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.331e-27
Identity = 58/118 (49.15%), Postives = 83/118 (70.34%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+   ITI NDKGRLS+ EI++MV EAEKY  EDE+ ++++ ++N LE+Y +N++  V+    G KLD ADK  + D  +  I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q
Sbjct:  493 TGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKQRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQ 609          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.648e-27
Identity = 52/118 (44.07%), Postives = 87/118 (73.73%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++  ITI NDKGRLS+ +I++MV EAEK++ EDE+ ++++ A+N LE Y +N++  + D +  SKL  AD+K ++D  ++ ++W+D N +A+ +EFE KM+EL   C+PI+ K++Q
Sbjct:  494 TGKEKNITIKNDKGRLSQADIDRMVSEAEKFREEDEKQRERISARNQLEAYCFNLKQSL-DGEGASKLSDADRKTVQDRCEETLRWIDGNTMADKEEFEHKMQELTKACSPIMTKLHQ 610          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 9.648e-27
Identity = 57/118 (48.31%), Postives = 83/118 (70.34%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+   ITI NDKGRLS+ EI++MV EAEKY  EDE+ ++++ ++N LE+Y +N++  V D+    KLD ADK  + D  +  I+WLDSN  AE +EF+ K++EL   C+PI+ KM+Q
Sbjct:  493 TGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKQRQRITSRNALESYVFNVKQAV-DQAPAGKLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKLEELTRHCSPIMTKMHQ 609          
The following BLAST results are available for this feature:
BLAST of CX296694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
HSP72_DROME2.999e-2850.00Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP72_PICAN3.917e-2848.72Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP73_PLAFA8.726e-2850.00Heat shock 70 kDa protein PPF203 (Fragment) OS=Pla... [more]
HSP72_USTMA8.726e-2847.01Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
MAG29_DERFA1.140e-2754.46Allergen MAG29 (Fragment) OS=Dermatophagoides fari... [more]
HSP71_DROME1.140e-2749.15Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME1.140e-2749.15Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
HSP72_DROSI4.331e-2749.15Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP74_ANOAL9.648e-2744.07Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP71_DROSI9.648e-2748.31Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]

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Properties
Property NameValue
Genbank descriptionC05801G06SK FerrChloL1 Citrus clementina cDNA clone C05801G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296694 ID=CX296694; Name=CX296694; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTTTTTTAGGGACCGAAAAATATTCATTATATAAATT
GGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTA
ATATTCCTCCTAAGGCTAAAACAACATAAGATAAAAACCAAACGTCCAGT
TTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAACAAAATAAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGGGGCACTGCCACCAG
CTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAAATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGGGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGGATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCGT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTATCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
CGTT
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