CX296694

Overview
NameCX296694
Unique NameCX296694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.648e-27
Identity = 56/118 (47.46%), Postives = 85/118 (72.03%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG+   ITITNDKGRLSK++IEKM+ +AEK+  ED+  ++KVEAKN L+NY  +M+  V+D +K+  K++  DK  I  A+  A  WL++N  A+++  + K+K+LE++C PII K+Y
Sbjct:  517 TGKSRGITITNDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNKLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLY 634          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.648e-27
Identity = 57/119 (47.90%), Postives = 90/119 (75.63%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEK-IGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 653
            TG+ N ITITNDKGRLSK+EIEK ++EAEK+  +D+E ++KVE++N LENYA++++N   DE   G+KL+  DK+ + DAI++A+++L+ N   A  DEF+++ ++L  +  PI +K+Y
Sbjct:  528 TGKSNSITITNDKGRLSKEEIEKKIEEAEKFAQQDKELREKVESRNALENYAHSLKNQANDENGFGAKLEEDDKETLLDAINEALEFLEDNFDTATKDEFDEQKEKLSKVAYPITSKLY 646          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.260e-26
Identity = 57/120 (47.50%), Postives = 88/120 (73.33%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEK-IGSKLDPADKKKIEDAIDQAIQWLDSNQL-AEADEFEDKMKELESICNPIIAKMYQ 653
            TG+   ITITNDKGRLSKDEIE+MV+EAE++  ED   ++ +EAKN LENYA+++RN V D+  +G K+   DK+ + DA+ + ++WL++N + A  ++FE+K + L +I  PI +K+Y+
Sbjct:  525 TGKSETITITNDKGRLSKDEIERMVEEAERFAEEDALIRETIEAKNSLENYAHSLRNQVADKSGLGGKISADDKEALNDAVTETLEWLEANSVSATKEDFEEKKEALSAIAYPITSKIYE 644          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFA (78 kDa glucose-regulated protein homolog (Fragment) OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.260e-26
Identity = 56/118 (47.46%), Postives = 85/118 (72.03%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG+   ITITNDKGRLSK++IEKM+ +AEK+  ED+  ++KVEAKN L+NY  +M+  V+D +K+  K++  DK  I  A+  A  WL++N  A+++  + K+K+LE++C PII K+Y
Sbjct:  141 TGKSRGITITNDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNNLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLY 258          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.149e-26
Identity = 51/118 (43.22%), Postives = 87/118 (73.73%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            +G++  ITI NDKGRLS+ +I++MV EAEKY+ EDE+ ++ + A+N LE Y +N++  + D +  SKL  AD++ ++D  D+ ++W+D N +AE +E+E +M+EL  +C+PI+ K++Q
Sbjct:  494 SGKEKNITIKNDKGRLSQADIDRMVSEAEKYREEDEKQREAIAARNQLEAYCFNLKQSL-DGEGSSKLSDADRRTVQDRCDETLRWIDGNTMAEKEEYEHQMQELSRVCSPIMTKLHQ 610          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.149e-26
Identity = 51/118 (43.22%), Postives = 87/118 (73.73%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            +G++  ITI NDKGRLS+ +I++MV EAEKY+ EDE+ ++ + A+N LE Y +N++  + D +  SKL  AD++ ++D  D+ ++W+D N +AE +E+E +M+EL  +C+PI+ K++Q
Sbjct:  494 SGKEKNITIKNDKGRLSQADIDRMVSEAEKYREEDEKQREAIAARNQLEAYCFNLKQSL-DGEGSSKLSEADRRTVQDRCDETLRWIDGNTMAEKEEYEHQMQELSRVCSPIMTKLHQ 610          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.788e-26
Identity = 56/121 (46.28%), Postives = 90/121 (74.38%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEK---IGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 653
            TG+   ITITNDKGRLSK++I++MV+EAEKY  +D E K K+E++N LENYA+ ++  VKDE    +GSKL+  DK+ ++DAI + +++++ N   A ++EFE++ ++L  + +PI +K+Y
Sbjct:  537 TGKSESITITNDKGRLSKEDIDRMVEEAEKYAEQDSELKAKIESRNSLENYAHMLKGQVKDESENGLGSKLNDDDKETLDDAIKETLEFIEDNYDSATSEEFEEQKQKLIDVASPITSKLY 657          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.788e-26
Identity = 59/118 (50.00%), Postives = 82/118 (69.49%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            +G K  ITITNDK RLS+ +I++MV+EA     ED+  K++VEAKN LENY Y ++N + D +KIG K++  DK+ IE AI  A+ WLD N  AE +EF+++ K LE I  PI +K+Y
Sbjct:  521 SGSKESITITNDKERLSQADIDRMVKEAADAADEDKAAKERVEAKNTLENYIYQIKNTIGDKDKIGGKIESDDKETIETAISDALSWLDVNSSAEKEEFDEQYKILEKIVQPIFSKLY 638          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 6.254e-26
Identity = 55/119 (46.22%), Postives = 88/119 (73.95%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEK-IGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 653
            TG+   ITITNDKGRL+++EI++MV EAEKY  ED+  ++++EA+N LENYA++++N V DE  +G K+D  DK+ I DA+ +A  WL+ N   A A++F+++ ++L ++  PI +K+Y
Sbjct:  527 TGKAESITITNDKGRLTQEEIDRMVAEAEKYAEEDKATRERIEARNGLENYAFSLKNQVNDEDGLGGKIDEEDKETILDAVKEAQDWLEENAATASAEDFDEQKEKLSNVAYPITSKLY 645          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.067e-25
Identity = 56/117 (47.86%), Postives = 77/117 (65.81%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG+  KITI+NDKGRLSK EI++M+ EAEKYK ED+  +++V++KN LE Y Y  R  V D   G  L   ++ K+ D       WLD N LAE +EFE  +KE + IC PI++K++
Sbjct:  496 TGKSEKITISNDKGRLSKAEIDRMLSEAEKYKVEDDRQRERVQSKNNLEAYIYACRQAVDDAPSG-VLSETERSKVRDKCSSEASWLDKNSLAEKEEFESHLKECQRICTPIMSKIH 611          
The following BLAST results are available for this feature:
BLAST of CX296694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
GRP78_PLAFO9.648e-2747.4678 kDa glucose-regulated protein homolog OS=Plasmo... [more]
GRP78_PICAN9.648e-2747.9078 kDa glucose-regulated protein homolog OS=Pichia... [more]
GRP78_YARLI1.260e-2647.5078 kDa glucose-regulated protein homolog OS=Yarrow... [more]
GRP78_PLAFA1.260e-2647.4678 kDa glucose-regulated protein homolog (Fragment... [more]
HSP72_ANOAL2.149e-2643.22Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL2.149e-2643.22Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
GRP78_DEBHA4.788e-2646.2878 kDa glucose-regulated protein homolog OS=Debary... [more]
BIP2_DICDI4.788e-2650.00Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
GRP78_NEUCR6.254e-2646.2278 kDa glucose-regulated protein homolog OS=Neuros... [more]
HSP7B_DROME1.067e-2547.86Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]

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Properties
Property NameValue
Genbank descriptionC05801G06SK FerrChloL1 Citrus clementina cDNA clone C05801G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296694 ID=CX296694; Name=CX296694; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTTTTTTAGGGACCGAAAAATATTCATTATATAAATT
GGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTA
ATATTCCTCCTAAGGCTAAAACAACATAAGATAAAAACCAAACGTCCAGT
TTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAACAAAATAAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGGGGCACTGCCACCAG
CTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAAATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGGGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGGATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCGT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTATCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
CGTT
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