CX296694

Overview
NameCX296694
Unique NameCX296694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23
Identity = 52/116 (44.83%), Postives = 82/116 (70.69%), Query Frame = -2
Query:  309 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWL-DSNQLAEADEFEDKMKELESICNPIIAK 653
            TG+   ITI NDKGRLS+D+I++MV+EAEKY AED + K K EA+N  EN+ + ++N V  E +   +D  DK+ + D ++++++WL D++ +AEA++FE+KM   +    PI+AK
Sbjct:  539 TGKSESITIANDKGRLSQDDIDRMVEEAEKYAAEDAKFKAKSEARNTFENFVHYVKNSVNGE-LAEIMDEDDKETVLDNVNESLEWLEDNSDVAEAEDFEEKMASFKESVEPILAK 653          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: GRP78_PIG (78 kDa glucose-regulated protein (Fragment) OS=Sus scrofa GN=HSPA5 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 8.452e-23
Identity = 48/100 (48.00%), Postives = 78/100 (78.00%), Query Frame = -2
Query:  357 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFE 653
            TG KNKITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY ++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+
Sbjct:  162 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYCLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFK 261          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7X_PIG (Heat shock 70 kDa protein (Fragment) OS=Sus scrofa PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.478e-22
Identity = 48/111 (43.24%), Postives = 77/111 (69.37%), Query Frame = -2
Query:  324 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQA-IQWLDSNQLAEADEFEDKMKELESICN 653
            TG+ NK+T+T+DKGRLSK+E+E+MV+EA  +K EDE  + +V AKN LE Y ++++  + +E +  K+   D+ K++D   +    WL+ NQLAE +E+E + +ELE I +
Sbjct:  236 TGRANKMTLTSDKGRLSKEEVERMVREAASHKVEDEAQRDRVAAKNSLEAYVFHVKGSLHEESLRDKIPEEDRCKVQDKCQEVPYLWLEHNQLAEKEEYEHQKRELEQIAS 346          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.638e-21
Identity = 46/68 (67.65%), Postives = 59/68 (86.76%), Query Frame = -2
Query:  450 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKL 653
            TG++NKITITNDKGRLSKDEIE+MVQEAEKYKA+DE  K ++ AKN LE+YA+NM+  ++DEK+  K+
Sbjct:  252 TGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKI 319          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.033e-20
Identity = 48/117 (41.03%), Postives = 73/117 (62.39%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            +G    ITI NDKGRLS+ EI++MV EA +Y  EDE  + K+ A+N LE+Y   ++       +  KL   +K ++  A D  I+WLD+ +LA+ +E+EDKM  L  +C PI+ K++
Sbjct:  493 SGNAKNITIKNDKGRLSQAEIDRMVNEAGRYAEEDERQRNKIAARNNLESYVLAVKQAW--TTLVDKLSEREKSEVTKACDDTIKWLDATRLADKEEYEDKMNTLTKLCTPIMTKLH 607          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_MIMIV (Heat shock 70 kDa protein homolog OS=Acanthamoeba polyphaga mimivirus GN=HSP70 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.063e-17
Identity = 38/117 (32.48%), Postives = 74/117 (63.25%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            T +   ITITN++GR S+D+IE+M++EA++++  D + K  V++KN LENY ++++  V D    + ++ + + +IE    + ++++D N   +   ++ + KELE + NPI   +Y
Sbjct:  495 TNKSKNITITNNRGRFSEDQIERMIREAKEFEEADNKKKAAVDSKNELENYTHSVKQAVTDPSNSNNIEESSRSQIESKCAEIMKFVDENPNEDQGTYDLRRKELEDLWNPIAVTLY 611          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP75_ZYGRC (Heat shock protein SSB OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=SSB PE=3 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 2.465e-14
Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = -2
Query:  366 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEAD 653
            TG+   ITI+N  GRLS DEIEKMV +AE++KA DE   KK EA+  LE+Y  ++   V D  + SKL    K KIE A+  A+  L+    +  D
Sbjct:  499 TGKSANITISNAVGRLSSDEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQQVTDPVLSSKLKRGSKTKIESALSDALASLEIQDASTDD 594          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP76_YEAST (Heat shock protein SSB2 OS=Saccharomyces cerevisiae GN=SSB2 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.491e-14
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = -2
Query:  309 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAK 653
            TG+ + ITI+N  GRLS +EIEKMV +AE++KA DE   KK EA+  LE+Y  ++   V D  + SKL    K KIE A+  A+  L        D   D++++ E     ++ K
Sbjct:  499 TGKSSNITISNAVGRLSSEEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALSDALAALQIE-----DPSADELRKAEVGLKRVVTK 608          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP75_YEAST (Heat shock protein SSB1 OS=Saccharomyces cerevisiae GN=SSB1 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 5.491e-14
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = -2
Query:  309 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAK 653
            TG+ + ITI+N  GRLS +EIEKMV +AE++KA DE   KK EA+  LE+Y  ++   V D  + SKL    K KIE A+  A+  L        D   D++++ E     ++ K
Sbjct:  499 TGKSSNITISNAVGRLSSEEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALSDALAALQIE-----DPSADELRKAEVGLKRVVTK 608          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP75_CANAL (Heat shock protein SSB1 OS=Candida albicans GN=SSB1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.598e-13
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = -2
Query:  360 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEF 653
            TG+   ITI+N  GRLS +EIEKM+ +AEK+K+ D+   K+ E K  LE Y  ++ + V D  + +KL  + K KIE A+  A+Q L+  + + AD++
Sbjct:  499 TGRSANITISNSIGRLSTEEIEKMISDAEKFKSSDDAFAKRHEQKQKLEAYVASVESTVTDPVLSAKLKKSAKDKIEAALSDALQTLEIEE-SSADDY 595          
The following BLAST results are available for this feature:
BLAST of CX296694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
GRP78_KLULA2.905e-2344.8378 kDa glucose-regulated protein homolog OS=Kluyve... [more]
GRP78_PIG8.452e-2348.0078 kDa glucose-regulated protein (Fragment) OS=Sus... [more]
HSP7X_PIG5.478e-2243.24Heat shock 70 kDa protein (Fragment) OS=Sus scrofa... [more]
HSP70_ONCVO4.638e-2167.65Heat shock 70 kDa protein (Fragment) OS=Onchocerca... [more]
HSP70_CERCA1.033e-2041.03Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
HSP70_MIMIV4.063e-1732.48Heat shock 70 kDa protein homolog OS=Acanthamoeba ... [more]
HSP75_ZYGRC2.465e-1444.79Heat shock protein SSB OS=Zygosaccharomyces rouxii... [more]
HSP76_YEAST5.491e-1439.13Heat shock protein SSB2 OS=Saccharomyces cerevisia... [more]
HSP75_YEAST5.491e-1439.13Heat shock protein SSB1 OS=Saccharomyces cerevisia... [more]
HSP75_CANAL1.598e-1340.82Heat shock protein SSB1 OS=Candida albicans GN=SSB... [more]

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Properties
Property NameValue
Genbank descriptionC05801G06SK FerrChloL1 Citrus clementina cDNA clone C05801G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296694 ID=CX296694; Name=CX296694; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTTTTTTAGGGACCGAAAAATATTCATTATATAAATT
GGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTA
ATATTCCTCCTAAGGCTAAAACAACATAAGATAAAAACCAAACGTCCAGT
TTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAACAAAATAAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGGGGCACTGCCACCAG
CTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAAATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGGGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGGATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCGT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTATCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
CGTT
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