CX296694

Overview
NameCX296694
Unique NameCX296694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPP (Chaperone protein dnaK OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaK PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12
Identity = 39/118 (33.05%), Postives = 68/118 (57.63%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++ KI I +  G LS+DEI +MV+EAE+   EDE+ KK +E KN  ++  ++    + +   G K+ P DK  IE+A+++  +   S+ + +AD  + K+  L  +   +   MY+
Sbjct:  487 TGKEQKIRIQSSGG-LSEDEINRMVREAEEKAQEDEKRKKFIEVKNQADSLVHSTEKSLTE--YGDKISPEDKSAIENAVNELKEVSKSDNIDDADSIQQKVTNLSQLSMKLGEAMYK 601          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: DNAK_METI4 (Chaperone protein dnaK OS=Methylacidiphilum infernorum (isolate V4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12
Identity = 41/118 (34.75%), Postives = 69/118 (58.47%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++ KITIT   G LSK+EIE+M +EAE Y+ +D ++K++ EAKN  +N AY     +++   G K+D A K ++E  I++  + +  +   + +  +  M EL      I  +MY+
Sbjct:  490 TGREQKITITGSSG-LSKEEIERMTKEAEAYREQDLKNKERAEAKNNADNAAYQAEKLLRE--YGDKVDSAKKMEVEKCIEKVREVIKGD---DTEAIKRAMDELNEKVQAISVEMYR 601          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: DNAK_DESRM (Chaperone protein dnaK OS=Desulfotomaculum reducens (strain MI-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12
Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG    I+IT   G LS DEI +MV EAEK+  ED++ K+ VE KN  ++  Y     +KD  +G   D A  + ++ A+++    ++ N   + D  ++K++EL    + + A +YQ
Sbjct:  464 TGTVQSISITGGTGGLSDDEINRMVNEAEKFAEEDKKRKEAVEVKNQADSLIYQAEKTIKD--LGENADKAKVEAVQKAVEELRTAMNGN---DTDLIKNKLEELTKPLHELTADLYQ 576          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP75_ASHGO (Heat shock protein SSB OS=Ashbya gossypii GN=SSB PE=3 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 8.767e-12
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = -2
Query:  366 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEAD 653
            TG+   ITI+N  GRLS ++IEKMV +AE++KA DE   K+ EA+  LE+Y  ++   V D  + +K+    K K+E A+  A   L   + +  D
Sbjct:  499 TGKTANITISNAIGRLSSEDIEKMVSQAEEFKAADEAFAKRHEARQRLESYVSSIEQTVSDPVLSAKMKKGAKSKVEAALADAFSALQIEESSAED 594          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: DNAK_GEOUR (Chaperone protein dnaK OS=Geobacter uraniireducens (strain Rf4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.767e-12
Identity = 40/118 (33.90%), Postives = 75/118 (63.56%), Query Frame = -2
Query:  309 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIED---AIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAK 653
            TG++  I IT   G LSK+EI+KMV++AE + +ED++ ++ +EA+N  ++ AY+    +K+   G K+D A+K+KIED   A+ +A++  D++ + +A   ++ M+    +   + AK
Sbjct:  488 TGKEQSIRITASSG-LSKEEIDKMVKDAEAHSSEDKKKRELIEARNQADSLAYSTEKSLKE--FGDKIDAAEKQKIEDGLAALKKAMEGSDADAIKKAS--DELMQASHKLAEAVYAK 600          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: DNAK_WOLWR (Chaperone protein dnaK OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=dnaK PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11
Identity = 39/118 (33.05%), Postives = 67/118 (56.78%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++ KI I +  G LS DEI +MV+EAE+   EDE+ KK +E KN  ++  ++    + +   G K+ P D+  IE+A+++  +   S+ + +AD  + K+  L  +   +   MYQ
Sbjct:  487 TGKEQKIRIQSSGG-LSDDEINRMVKEAEEKAQEDEKRKKFIEVKNQADSLVHSTEKSLTE--YGDKVSPEDRSAIENAVNELKEVSKSDNIDDADSIQQKVTNLSQLSMKLGEAMYQ 601          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: DNAK_CAMLR (Chaperone protein dnaK OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=dnaK PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11
Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+  +I IT   G LS++EI  MV++AE +K ED + K+ VEA+N  ++  + +   + +  +G K+   DK  I+ A+D   + L  N  A  +E E KMK L  + + +   MY+
Sbjct:  487 TGKAQEIKITGSSG-LSEEEINNMVKDAELHKEEDRKRKEAVEARNSADSLVHQVEKSLSE--LGEKVSDEDKANIQKALDDLKETL-KNANASKEEIESKMKTLSEVSHKLAENMYK 600          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: DNAK_ACIBL (Chaperone protein dnaK OS=Acidobacteria bacterium (strain Ellin345) GN=dnaK PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11
Identity = 37/118 (31.36%), Postives = 72/118 (61.02%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+  KITIT+  G LSK+E+E+M +EA+ + AED+  K+++EA+N L+   Y +   +K+   G K+ P+++  +E+A+  + + L++N   +A +     + L +  + +   MY+
Sbjct:  487 TGKDQKITITSSSG-LSKEEVERMAKEADAHAAEDKAKKEEIEARNQLDGMVYQIEKMLKEN--GDKISPSERGDVENALADSKKALETN---DAKQMNAARERLTAASHKLAEAMYK 598          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP75_KLUMA (Heat shock protein SSB OS=Kluyveromyces marxianus GN=SSB PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.495e-11
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = -2
Query:  363 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADE 653
            TG+   ITI+N  GRLS +EIE+MV +AE++KA DE   KK EA+  LE+Y  +++  V D  + +K+    K K+E A+  A   L     A AD+
Sbjct:  499 TGKSANITISNAIGRLSSEEIEQMVNQAEEFKAADEAFAKKHEARQRLESYISSVQQTVTDPVLSAKIKRNAKAKVEAALADAFSTLQIED-ASADD 594          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP75_KLULA (Heat shock protein SSB OS=Kluyveromyces lactis GN=SSB PE=3 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.495e-11
Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = -2
Query:  366 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEAD 653
            TG+   ITI+N  GRLS +EIE+MV +AE++KA DE   KK EA+  LE+Y  ++   V D  + +K+    K K+E A+ +A   L     +  D
Sbjct:  499 TGKSANITISNAIGRLSSEEIEQMVNQAEEFKAADEAFAKKHEARQRLESYISSVEQTVTDPVLSAKIKRNAKAKVEAALAEAFSTLQIEDASTDD 594          
The following BLAST results are available for this feature:
BLAST of CX296694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
DNAK_WOLPP6.712e-1233.05Chaperone protein dnaK OS=Wolbachia pipientis subs... [more]
DNAK_METI46.712e-1234.75Chaperone protein dnaK OS=Methylacidiphilum infern... [more]
DNAK_DESRM6.712e-1233.05Chaperone protein dnaK OS=Desulfotomaculum reducen... [more]
HSP75_ASHGO8.767e-1238.54Heat shock protein SSB OS=Ashbya gossypii GN=SSB P... [more]
DNAK_GEOUR8.767e-1233.90Chaperone protein dnaK OS=Geobacter uraniireducens... [more]
DNAK_WOLWR1.145e-1133.05Chaperone protein dnaK OS=Wolbachia sp. subsp. Dro... [more]
DNAK_CAMLR1.145e-1133.90Chaperone protein dnaK OS=Campylobacter lari (stra... [more]
DNAK_ACIBL1.145e-1131.36Chaperone protein dnaK OS=Acidobacteria bacterium ... [more]
HSP75_KLUMA1.495e-1141.24Heat shock protein SSB OS=Kluyveromyces marxianus ... [more]
HSP75_KLULA1.495e-1139.58Heat shock protein SSB OS=Kluyveromyces lactis GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05801G06SK FerrChloL1 Citrus clementina cDNA clone C05801G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296694 ID=CX296694; Name=CX296694; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTTTTTTAGGGACCGAAAAATATTCATTATATAAATT
GGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTA
ATATTCCTCCTAAGGCTAAAACAACATAAGATAAAAACCAAACGTCCAGT
TTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAACAAAATAAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGGGGCACTGCCACCAG
CTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAAATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGGGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGGATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCGT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTATCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
CGTT
back to top