CX296694

Overview
NameCX296694
Unique NameCX296694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.442e-39
Identity = 76/118 (64.41%), Postives = 95/118 (80.51%), Query Frame = -2 
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  +++V AKN LE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  495 TGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEIQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612
[Close]
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.099e-38
Identity = 76/118 (64.41%), Postives = 93/118 (78.81%), Query Frame = -2 
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE  + +V AKN LE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLD+N LAE DEFE K KELE +CNPII  +YQ
Sbjct:  495 TGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRDRVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIITGLYQ 612
[Close]
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.435e-38
Identity = 74/118 (62.71%), Postives = 96/118 (81.36%), Query Frame = -2 
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN LE+YA+NM+  V+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  495 TGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.435e-38
Identity = 74/118 (62.71%), Postives = 96/118 (81.36%), Query Frame = -2 
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN LE+YA+NM+  V+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  495 TGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.435e-38
Identity = 74/118 (62.71%), Postives = 96/118 (81.36%), Query Frame = -2 
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN LE+YA+NM+  V+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  495 TGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.435e-38
Identity = 74/118 (62.71%), Postives = 96/118 (81.36%), Query Frame = -2 
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN LE+YA+NM+  V+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  495 TGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.435e-38
Identity = 74/118 (62.71%), Postives = 96/118 (81.36%), Query Frame = -2 
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN LE+YA+NM+  V+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  495 TGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.435e-38
Identity = 74/118 (62.71%), Postives = 96/118 (81.36%), Query Frame = -2 
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN LE+YA+NM+  V+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  495 TGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.435e-38
Identity = 74/118 (62.71%), Postives = 96/118 (81.36%), Query Frame = -2 
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN LE+YA+NM+  V+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  495 TGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
[Close]
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.435e-38
Identity = 74/118 (62.71%), Postives = 96/118 (81.36%), Query Frame = -2 
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN LE+YA+NM+  V+DEK+  K++  DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  495 TGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
The following BLAST results are available for this feature:
BLAST of CX296694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
HS71B_PIG6.442e-3964.41Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HSP71_CANFA1.099e-3864.41Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HSP7C_SAGOE1.435e-3862.71Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT1.435e-3862.71Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB1.435e-3862.71Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_MOUSE1.435e-3862.71Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN1.435e-3862.71Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE1.435e-3862.71Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR1.435e-3862.71Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN1.435e-3862.71Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionC05801G06SK FerrChloL1 Citrus clementina cDNA clone C05801G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296694 ID=CX296694; Name=CX296694; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTTTTTTAGGGACCGAAAAATATTCATTATATAAATT
GGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTA
ATATTCCTCCTAAGGCTAAAACAACATAAGATAAAAACCAAACGTCCAGT
TTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAACAAAATAAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGGGGCACTGCCACCAG
CTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAAATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGGGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGGATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCGT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTATCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
CGTT
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