CX296694

Overview
NameCX296694
Unique NameCX296694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.874e-37
Identity = 70/118 (59.32%), Postives = 95/118 (80.51%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            T ++NKITITNDKGRLSK+EIE+MV EAEKY+ EDE+ K+ ++AKN LE+Y +NM++ ++DEK+  K+  +DK+ I D  +  I+WLDSNQLA+ +E+E K KELE ICNPII K+YQ
Sbjct:  495 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDEKQKETIQAKNALESYCFNMKSTMEDEKLKDKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKLYQ 612          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.874e-37
Identity = 71/118 (60.17%), Postives = 93/118 (78.81%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSKD+I++MVQEAEKYKAEDE ++ +V AKN LE+Y YNM+  V+DEK+  K+   DK+K+ D   + I  LD NQ+AE +E+E K KELE +CNPI+ K+YQ
Sbjct:  498 TGKENKITITNDKGRLSKDDIDRMVQEAEKYKAEDEANRDRVGAKNSLESYTYNMKQTVEDEKLKGKISDQDKQKVLDKCQEVISSLDRNQMAEKEEYEHKQKELEKLCNPIVTKLYQ 615          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.028e-36
Identity = 67/118 (56.78%), Postives = 95/118 (80.51%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG +NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + K+ AKN LE+ A+N+++  +D+ +  K+   D+K++ +  D+ I WL++NQLA+ DEF+ K KELE +CNPII+K+YQ
Sbjct:  497 TGNENKITITNDKGRLSKEDIERMVQEAEKYKAEDEQQRDKIAAKNSLESLAFNLKSSAQDDSLKDKISQEDRKRVVEKCDETIAWLENNQLADKDEFQHKQKELEKVCNPIISKLYQ 614          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.028e-36
Identity = 70/118 (59.32%), Postives = 97/118 (82.20%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+ NKITITNDKGRLSK+EIE+MV+EAEKYK EDE+  KK+EAKN LENYAYN+RN V+DEK+  K+   DKK IE+ + + ++++++N+  E +E+E+K KEL++  NPII+K+YQ
Sbjct:  501 TGKSNKITITNDKGRLSKEEIERMVEEAEKYKTEDEKLDKKLEAKNSLENYAYNIRNTVRDEKLKEKIQEEDKKSIEEKVKEVLEFIETNEDLEKEEYEEKEKELKNFANPIISKLYQ 618          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.343e-36
Identity = 70/117 (59.83%), Postives = 89/117 (76.07%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            T + NKITITNDKGRLSK+EIE+MV EAEKYK EDEE   +++AKN LE+YAYN+RN + D+K+  K+D ADK+ +  AID+ I WLD NQ    DE+E K KELE + NPI+ K+Y
Sbjct:  498 TNRSNKITITNDKGRLSKEEIERMVAEAEKYKKEDEEAASRIQAKNGLESYAYNLRNTLNDDKVAGKMDAADKETLNKAIDETISWLDGNQEGAKDEYEHKQKELEGVANPIMTKLY 614          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.343e-36
Identity = 72/118 (61.02%), Postives = 93/118 (78.81%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+ NKITITNDKGRLSK+EIE+MV +AEKYKAEDE  ++K+ AKN LE+YA+NM++ V DE +  K+  +DK KI D  ++ + WL+ NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  497 TGKVNKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKNKILDKCNELLSWLEVNQLAEKDEFDHKRKELEQMCNPIITKLYQ 614          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.291e-36
Identity = 71/118 (60.17%), Postives = 93/118 (78.81%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN L++YA+NM+  V+DEK+  K+   D + I D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  495 TGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLDSYAFNMKATVEDEKLPGKILDEDHQNILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.992e-36
Identity = 70/118 (59.32%), Postives = 92/118 (77.97%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITITNDKGRLSK++IE+MVQEAEKYK ED+  + KV +KN LE+YA+NM++ V+DEK+  K+   DK KI +  ++ I WLD NQ AE +E+E   KELE +CNPII K+YQ
Sbjct:  495 TGKENKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQ 612          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.908e-36
Identity = 67/118 (56.78%), Postives = 97/118 (82.20%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++NKITIT DKGRLSK+EIE+MV +AEK+K EDE+ + +V AKN LE+YA++M++ V+DEK+  K+  +D+++I +  ++ ++WLD NQ AE +E+E + KELES+CNPIIAKMYQ
Sbjct:  497 TGKQNKITITRDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCNPIIAKMYQ 614          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 3.908e-36
Identity = 72/118 (61.02%), Postives = 93/118 (78.81%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+ NKITITNDKGRLSK+EIE+MVQEAE+YKAEDE  + +V AKN LE+YA+NM++ V+DE +  KL  ADKKK+ D   + I WLDSN LA+ +EF  K +ELE +C+PII+ +YQ
Sbjct:  495 TGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQ 612          
The following BLAST results are available for this feature:
BLAST of CX296694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
HSP7D_MANSE7.874e-3759.32Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP70_CHICK7.874e-3760.17Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP71_ORYLA1.028e-3656.78Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP70_PYRSA1.028e-3659.32Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_BLAEM1.343e-3659.83Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HS71L_HUMAN1.343e-3661.02Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HSP7C_CHICK2.291e-3660.17Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP70_ONCMY2.992e-3659.32Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP70_ECHGR3.908e-3656.78Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HS71B_MOUSE3.908e-3661.02Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05801G06SK FerrChloL1 Citrus clementina cDNA clone C05801G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296694 ID=CX296694; Name=CX296694; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTTTTTTAGGGACCGAAAAATATTCATTATATAAATT
GGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTA
ATATTCCTCCTAAGGCTAAAACAACATAAGATAAAAACCAAACGTCCAGT
TTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAACAAAATAAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGGGGCACTGCCACCAG
CTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAAATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGGGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGGATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCGT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTATCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
CGTT
back to top