CX296694

Overview
NameCX296694
Unique NameCX296694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig752 contig Ccv1_Contig752:4..657. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.144e-34
Identity = 66/118 (55.93%), Postives = 93/118 (78.81%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++N ITITNDKGRLS+DEI++MV +AEKYKAEDEE++K++EA+N LENY Y +++ ++D+KI  KL PA+ +     I   ++WL+ NQLA  DE+E K KE ES+C PI++K+YQ
Sbjct:  508 TGKQNHITITNDKGRLSQDEIDRMVNDAEKYKAEDEENRKRIEARNSLENYCYGVKSSLEDQKIKEKLQPAEIETCMKTITTILEWLEKNQLAGKDEYEAKQKEAESVCAPIMSKIYQ 625          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.801e-34
Identity = 66/117 (56.41%), Postives = 88/117 (75.21%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG+ NKI ITNDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKN LE+YAY+++N + D K+  KLD ADK+K++  ID+ + WLD NQ A  +E+E + KELE + NPI+ K Y
Sbjct:  494 TGKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAETARIGAKNGLESYAYSLKNTLSDSKVDEKLDAADKEKLKSEIDKVVAWLDDNQTATKEEYESQQKELEGVANPIMMKFY 610          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.777e-34
Identity = 67/118 (56.78%), Postives = 89/118 (75.42%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++N ITITNDKGRLSKDEIE+MV +A KY+  D+  +  +EAKN LENYAY+M+N V D  +  KL+ +D+  +  AID A++WL+SNQ A  +E+E + KELES CNPI+ KMYQ
Sbjct:   72 TGKRNHITITNDKGRLSKDEIERMVNDASKYEQADKMQRDALEAKNGLENYAYSMKNTVSDTNVSGKLEESDRSALNLAIDTALEWLNSNQEASKEEYEHRQKELESTCNPIMTKMYQ 189          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_ALTAL (Heat shock 70 kDa protein (Fragment) OS=Alternaria alternata GN=HSP70 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 6.239e-34
Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = -2
Query:  303 NKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 641
            NKI ITNDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKN LE+YAY++RN + D K+  KLD  DK+K+   ID+ +QWLD NQ A  DE+E + KELE + NPI+ K Y
Sbjct:    3 NKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEAARISAKNALESYAYSLRNTLSDSKVDEKLDAGDKQKLTAEIDKTVQWLDDNQTATKDEYESQQKELEGVANPIMMKFY 115          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: BIP3_TOBAC (Luminal-binding protein 3 (Fragment) OS=Nicotiana tabacum GN=BIP3 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.239e-34
Identity = 63/119 (52.94%), Postives = 97/119 (81.51%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+  KITITNDKGRLS++EIE+MV+EAE++  ED++ K++++A+N LE Y YNM+N + D +K+  KL+  +K+KIE A+ +A++WLD NQ AE +++E+K+KE+E++CNPII  +YQ
Sbjct:   30 TGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNGLETYVYNMKNQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 148          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.149e-34
Identity = 64/118 (54.24%), Postives = 93/118 (78.81%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++N ITITNDKGRLS +EI++MV +AEKYKAEDEE+KK++EA+N LENY Y +++ ++D+KI  KL P++ +    +I   ++WL+ NQLA  +E+E K KE ES+C PI++K+YQ
Sbjct:  508 TGKQNHITITNDKGRLSPEEIDRMVNDAEKYKAEDEENKKRIEARNSLENYCYGVKSSLEDQKIKEKLQPSEIETCMKSITTILEWLEKNQLASKEEYESKQKEAESVCAPIMSKIYQ 625          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.064e-33
Identity = 64/117 (54.70%), Postives = 93/117 (79.49%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG K+KITITNDKGRL+ ++IEKMV++AE +KA+DE  ++ VE+KN LENYAY +R+ +KD+KI +KL   D+K +E+  D+AI WL +N  A  +E+E  MK+LE++C+PII+K+Y
Sbjct:  494 TGNKHKITITNDKGRLTAEQIEKMVKDAEMFKAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEEKSDEAINWLHANDSATKEEYEKAMKDLEAVCSPIISKVY 610          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: BIP1_TOBAC (Luminal-binding protein 1 (Fragment) OS=Nicotiana tabacum GN=BIP1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.064e-33
Identity = 64/119 (53.78%), Postives = 96/119 (80.67%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+  KITITNDKGRLS++EIE+MV+EAE++  ED++ K++++A+N LE Y YNM+N + D +K+  KL+  +K+KIE A  +A++WLD NQ AE +++E+K+KE+E+ICNPII  +YQ
Sbjct:  151 TGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQ 269          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.390e-33
Identity = 61/118 (51.69%), Postives = 94/118 (79.66%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++N+I +TNDKGRLS+ EIE+MV+EA KY+AED++  ++++AKN LENYA++M+N V D  +  K++ ADKK I  A+++A++WL++NQ A  +E+E + KELE++C PI+  MYQ
Sbjct:  498 TGKRNQIVLTNDKGRLSRAEIERMVREAAKYEAEDKDQVRQIDAKNGLENYAFSMKNAVNDPNVAGKIEEADKKTITSAVEEALEWLNNNQEASKEEYEHRQKELENLCTPIMTNMYQ 615          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: BIP2_TOBAC (Luminal-binding protein 2 (Fragment) OS=Nicotiana tabacum GN=BIP2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.390e-33
Identity = 63/119 (52.94%), Postives = 96/119 (80.67%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+  KITITNDKGRLS++EIE+MV+EAE++  ED++ K++++A+N LE Y YNM+N + D +K+  KL+  +K+KIE A  +A++WLD NQ AE +++E+K+KE+E++CNPII  +YQ
Sbjct:  151 TGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 269          
The following BLAST results are available for this feature:
BLAST of CX296694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
HSP70_PLAFA2.144e-3455.93Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_TRIRU2.801e-3456.41Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_LEIBR4.777e-3456.78Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP70_ALTAL6.239e-3458.41Heat shock 70 kDa protein (Fragment) OS=Alternaria... [more]
BIP3_TOBAC6.239e-3452.94Luminal-binding protein 3 (Fragment) OS=Nicotiana ... [more]
HSP70_PLACB8.149e-3454.24Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HS7C2_DICDI1.064e-3354.70Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
BIP1_TOBAC1.064e-3353.78Luminal-binding protein 1 (Fragment) OS=Nicotiana ... [more]
HSP70_TRYCR1.390e-3351.69Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
BIP2_TOBAC1.390e-3352.94Luminal-binding protein 2 (Fragment) OS=Nicotiana ... [more]

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Properties
Property NameValue
Genbank descriptionC05801G06SK FerrChloL1 Citrus clementina cDNA clone C05801G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296694 ID=CX296694; Name=CX296694; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTTTTTTAGGGACCGAAAAATATTCATTATATAAATT
GGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTA
ATATTCCTCCTAAGGCTAAAACAACATAAGATAAAAACCAAACGTCCAGT
TTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAACAAAATAAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGGGGCACTGCCACCAG
CTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAAATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGGGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGGATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCGT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTATCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
CGTT
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