CX296694

Overview
NameCX296694
Unique NameCX296694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig752 contig Ccv1_Contig752:4..657. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.044e-33
Identity = 62/119 (52.10%), Postives = 96/119 (80.67%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            +G+  KITITNDKGRLS++EIE+MV+EAE++  ED++ K++++A+N LE Y YNMRN + D +K+  KL+  +K+KIE A  +A++WLD NQ AE +++++K+KE+E++CNPII  +YQ
Sbjct:  527 SGKSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQ 645          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 5.282e-33
Identity = 62/118 (52.54%), Postives = 92/118 (77.97%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            T ++NKITITNDKGRLSK++IE+MV EAEKY+ EDE+ K+ + AKN LE+Y +NM+  + ++ + +K+  +D+  I D  ++ I+WLD+NQLA+ +E+E + KELE +CNPII K+YQ
Sbjct:  495 TNKENKITITNDKGRLSKEDIERMVNEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLADKEEYEHRQKELEGVCNPIITKLYQ 612          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 6.898e-33
Identity = 61/118 (51.69%), Postives = 89/118 (75.42%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++N+I ITNDKGRLSK +IE+MV +A KY+AED+ H   ++AKN LENYA++M+N + D  +  KLD ADK  +  A+++A++WL+ NQ A  +E+  + KELE +C PI++KMYQ
Sbjct:  498 TGKRNQIVITNDKGRLSKADIERMVSDAAKYEAEDKAHVXXIDAKNGLENYAFSMKNTINDPNVAGKLDDADKNAVTTAVEEALRWLNDNQEASLEEYNHRQKELEGVCAPILSKMYQ 615          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.009e-33
Identity = 63/117 (53.85%), Postives = 87/117 (74.36%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            T + NKI ITNDKGRLSK+EIE+M+ EAEKYKAEDE    ++  KN LE+YAY++RN ++  K+  KL+  DK+K++  ID+ +QWLD NQ A  +E+E + KELE++ NPI+ K Y
Sbjct:  494 TRKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRIRPKNGLESYAYSLRNSLRHSKVDEKLEAGDKEKLKSEIDKTVQWLDENQTATKEEYESQQKELEAVANPIMMKFY 610          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.177e-32
Identity = 60/118 (50.85%), Postives = 92/118 (77.97%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+   +TITNDKGRLS++EI++MV+EAEKYK EDE+ +K VE+K+ LENY Y+M+N + ++++  KL   +     + I +A++W+++NQLAE DEFEDK+K +E +CNP++ K+YQ
Sbjct:  496 TGKSEHVTITNDKGRLSQEEIDRMVEEAEKYKEEDEKRRKCVESKHKLENYCYSMKNTLSEDQVKQKLGADEVDNALNTITEALKWVETNQLAEHDEFEDKLKHVEGVCNPLVTKLYQ 613          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.177e-32
Identity = 64/117 (54.70%), Postives = 90/117 (76.92%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG+ NKITITNDKGRLSK++IE+M+ +AEKYKAEDE    +++AKN LE+YAY+++N + + ++  ++   DKKK+ D ID+ I WLD+NQ AE DE+E + KELE + NPII+  Y
Sbjct:  493 TGKTNKITITNDKGRLSKEDIERMLADAEKYKAEDEAEAARIQAKNGLESYAYSLKNTISEGQL--QISEDDKKKVSDKIDEVISWLDNNQTAEKDEYESQQKELEGVANPIISAAY 607          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.537e-32
Identity = 61/118 (51.69%), Postives = 89/118 (75.42%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++N+ITITNDKGRLSK++IE+MV +AE Y+  DE+ + ++ AKN LE+Y + +R+ + DE + S+  PAD++ I+    + I WLD+NQLAE  EFE K +ELE IC+PII ++YQ
Sbjct:  495 TGKENRITITNDKGRLSKEDIERMVNDAEAYRQADEQQRDRINAKNQLESYCFQLRSTLDDEHLSSRFSPADRETIQQRSSETIAWLDANQLAERQEFEHKQQELERICSPIITRLYQ 612          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.471e-32
Identity = 61/119 (51.26%), Postives = 96/119 (80.67%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            +G+  KITITN+KGRLS++EI++MV+EAE++  ED++ K+K++A+N LE Y YNM+N V D +K+  KL+  +K+KIE A  +A++WLD NQ +E +E+++K+KE+E++CNPII  +YQ
Sbjct:  526 SGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.471e-32
Identity = 61/119 (51.26%), Postives = 96/119 (80.67%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            +G+  KITITN+KGRLS++EI++MV+EAE++  ED++ K+K++A+N LE Y YNM+N V D +K+  KL+  +K+KIE A  +A++WLD NQ +E +E+++K+KE+E++CNPII  +YQ
Sbjct:  526 SGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 7.627e-32
Identity = 61/117 (52.14%), Postives = 86/117 (73.50%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG+ NKITITNDKGRLSKD+I++MV EAEKY+A+DE   ++V+AKN LE+YA+ ++N + +     K+   D K++E A  + I WLD++Q A  DE++D+ KELE I NPI+ K Y
Sbjct:  493 TGKSNKITITNDKGRLSKDDIDRMVSEAEKYRADDEREAERVQAKNQLESYAFTLKNTINEASFKEKVGEDDAKRLETASQETIDWLDASQAASTDEYKDRQKELEGIANPIMTKFY 609          
The following BLAST results are available for this feature:
BLAST of CX296694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
BIP5_TOBAC4.044e-3352.10Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
HSP7D_DROME5.282e-3352.54Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP74_TRYBB6.898e-3351.69Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_AJECA9.009e-3353.85Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP70_THEPA1.177e-3250.85Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_EMENI1.177e-3254.70Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP7A_DROME1.537e-3251.69Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
BIP2_ARATH4.471e-3251.26Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP1_ARATH4.471e-3251.26Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
HSP73_YEAST7.627e-3252.14Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionC05801G06SK FerrChloL1 Citrus clementina cDNA clone C05801G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296694 ID=CX296694; Name=CX296694; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTTTTTTAGGGACCGAAAAATATTCATTATATAAATT
GGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTA
ATATTCCTCCTAAGGCTAAAACAACATAAGATAAAAACCAAACGTCCAGT
TTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAACAAAATAAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGGGGCACTGCCACCAG
CTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAAATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGGGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGGATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCGT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTATCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
CGTT
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