CX296698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296698 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 8.104e-54 Identity = 98/113 (86.73%), Postives = 105/113 (92.92%), Query Frame = -2 Query: 109 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 447 HAQSILA+WA QVVLMG +EGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 153 HAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
BLAST of CX296698 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 8.104e-54 Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = -2 Query: 109 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 447 HAQSILAIWACQVVLMG +EGYR+ GG LGE DPL PGG+FDPLGLADDPEA AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK Sbjct: 154 HAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
BLAST of CX296698 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 1.382e-53 Identity = 99/113 (87.61%), Postives = 105/113 (92.92%), Query Frame = -2 Query: 109 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 447 HAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 153 HAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
BLAST of CX296698 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 3.080e-53 Identity = 102/114 (89.47%), Postives = 105/114 (92.11%), Query Frame = -2 Query: 109 HAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 447 HAQSILAIWA QV+LMGAVEGYR+AG GPLGE D LYPGGSFDPL DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 11 HAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 124
BLAST of CX296698 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 6.861e-53 Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = -2 Query: 109 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 447 HAQSILAIWA QVVLMG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDP++FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+ADPV NNAWA+ATNFVPG+ Sbjct: 153 HAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
BLAST of CX296698 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 8.960e-53 Identity = 97/113 (85.84%), Postives = 104/113 (92.04%), Query Frame = -2 Query: 109 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 447 HAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 151 HAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of CX296698 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 8.960e-53 Identity = 97/113 (85.84%), Postives = 104/113 (92.04%), Query Frame = -2 Query: 109 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 447 HAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 151 HAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of CX296698 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 6.877e-45 Identity = 87/111 (78.38%), Postives = 95/111 (85.59%), Query Frame = -2 Query: 115 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 447 HAQ+I+A A QVVLMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFS FGFFVQAIVTGKGP++NLADHLADP NNA+A AT F P Sbjct: 144 HAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
BLAST of CX296698 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.613e-44 Identity = 85/111 (76.58%), Postives = 94/111 (84.68%), Query Frame = -2 Query: 115 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 447 HAQ+I+A A QVVLMG VEGYR+ GGP GE DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLAMF+ GFFVQAIVTGKGP+ENL DHLA+P NNA+AYAT F P Sbjct: 162 HAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
BLAST of CX296698 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 4.457e-44 Identity = 91/112 (81.25%), Postives = 97/112 (86.61%), Query Frame = -2 Query: 112 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 447 HAQSILAIW +V+LMGAVEGYRIA GPLGEVTDPLYPG SFD LGLA+D EAFAELKVKE+KNGRLAMFSMFGFFVQAIV+ K LENLADHL VNNNA + TNFVPG Sbjct: 157 HAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYPG-SFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267 The following BLAST results are available for this feature:
BLAST of CX296698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296698 ID=CX296698; Name=CX296698; organism=Citrus clementina; type=EST; length=484bpback to top |