CX296714
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296714 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14 Identity = 37/55 (67.27%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 17 PRPPIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEK 181 P IDFFGALRARVYDDEVRKW K LVNSKE PTFEQP+MT+EK Sbjct: 338 PGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEK 392
BLAST of CX296714 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13 Identity = 36/55 (65.45%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 17 PRPPIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEK 181 P IDFFGALRARVYDDEVRKW K LVNSKE PTFEQP+MT++K Sbjct: 338 PGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDK 392
BLAST of CX296714 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.589e-13 Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 2 Query: 17 PRPPIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEK 181 P IDFFGALRARVYDDEVRKW ++LVNSKE+ PTF+QP+MT+EK Sbjct: 335 PGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEK 389
BLAST of CX296714 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.075e-13 Identity = 35/55 (63.64%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 17 PRPPIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEK 181 P IDFFGALRARVYDDEVRKW K LVNSKE PTF+QP+MT++K Sbjct: 342 PGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDK 396
BLAST of CX296714 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.540e-13 Identity = 35/55 (63.64%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 17 PRPPIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEK 181 P IDFFGALRARVYDDEVRKW K LVNS+E PTF+QP+MT+EK Sbjct: 325 PGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEK 379
BLAST of CX296714 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.038e-13 Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 17 PRPPIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEK 181 P IDFFGALRARVYDDEVRKW K LVNSKE PTF+QP+M+++K Sbjct: 340 PGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDK 394
BLAST of CX296714 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 7.886e-13 Identity = 35/55 (63.64%), Postives = 38/55 (69.09%), Query Frame = 2 Query: 17 PRPPIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEK 181 P IDFFGALRARVYDDEVRKW K LVNS+E P FEQP+MT+EK Sbjct: 329 PGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEK 383
BLAST of CX296714 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 7.886e-13 Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 17 PRPPIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEK 181 P IDFFGALRARVYDDEVR+W + LVNSKE PTFEQP++T+EK Sbjct: 334 PGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEK 388
BLAST of CX296714 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.345e-12 Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 17 PRPPIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEK 181 P IDFFGALRARVYDDEVRKW + L+NS++ PTFEQP+MT+EK Sbjct: 337 PGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEK 391
BLAST of CX296714 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.294e-12 Identity = 34/55 (61.82%), Postives = 38/55 (69.09%), Query Frame = 2 Query: 17 PRPPIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEK 181 P IDFFGALRARVY DEVRKW K LVNSKE P+FEQP+MT++K Sbjct: 338 PGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDK 392 The following BLAST results are available for this feature:
BLAST of CX296714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296714 ID=CX296714; Name=CX296714; organism=Citrus clementina; type=EST; length=182bpback to top |