CX296720
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: GCN5_YEAST (Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae GN=GCN5 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12 Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 428 KRPKMDRGVTHQCSV--ILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIKME 751 +RPK RG H ++ IL L H A W F +PV+ K ++PDY+ I +PMDL T++ +L+ N Y ++F+ D RL F+N +YN +K A L K + K++ Sbjct: 325 QRPK--RG-PHDAAIQNILTELQNHAAAWPFLQPVN--KEEVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIYDARLVFNNCRMYNGENTSYYKYANRLEKFFNNKVK 429
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: GCN5_CANGA (Histone acetyltransferase GCN5 OS=Candida glabrata GN=GCN5 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12 Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 2 Query: 428 KRPKMDRGVTHQCSV--ILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIKME 751 +RPK RG H ++ IL L H A W F RPV+ K ++PDY+ I +PMDL T++ +L+ N Y +EF+ D RL +N LYN +K A L K + K++ Sbjct: 432 QRPK--RG-PHYAAIQNILVELQNHAAAWPFLRPVN--KEEVPDYYEFIKEPMDLSTMELKLENNKYEKMEEFIYDARLVCNNCRLYNGENTSYYKYANRLEKFFNNKVK 536
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: BPTF_HUMAN (Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 2 Query: 473 ILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQEL 724 +L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+ F N YNP + ++ A+ L Sbjct: 2939 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVL 3020
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: EP300_HUMAN (Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12 Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 2 Query: 497 PAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPE----KYVHKMAQELNKSLDIKMES 754 P F +PVDP L IPDYF I+ PMDL T+K +LD Y ++V D+ L F+NA LYN KY K+++ + +D M+S Sbjct: 1070 PESLPFRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQEPWQYVDDIWLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEIDPVMQS 1159
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: CBP_HUMAN (CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12 Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 2 Query: 497 PAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPE----KYVHKMAQELNKSLDIKMES 754 P F +PVDP L IPDYF I+ PMDL T+K +LD Y ++V DV L F+NA LYN K+ K+A+ + +D M+S Sbjct: 1106 PESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQS 1195
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: NU301_DROME (Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12 Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 2 Query: 473 ILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQEL 724 ++K + +H + W F PVDP + PDY+ +I +PMDL ++ +L+ N Y+ EF+ D+ F N YNP E +K A+ L Sbjct: 2568 LIKQMQLHKSAWPFMEPVDPK--EAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDMTKIFDNCRYYNPKESSFYKCAEAL 2649
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: BDF1_YEAST (Bromodomain-containing factor 1 OS=Saccharomyces cerevisiae GN=BDF1 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12 Identity = 47/161 (29.19%), Postives = 75/161 (46.58%), Query Frame = 2 Query: 272 SSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM--HPA-GWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIK 745 SS E +++ + +G K H + I P+ ++ PK KR + C +LK LM H + + F PVDP+ +++P YF + +PMDLGT+ +L+ Y ++F DVRL F N +NP V+ M L + + K Sbjct: 269 SSAQEDAPIVIRRAQTHNGRPKRTI--HPPKSKDIYPYESKK-------PKSKRLQQ---AMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSK 417 HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11 Identity = 46/165 (27.88%), Postives = 81/165 (49.09%), Query Frame = 2 Query: 269 SSSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSI-LPFNKRQAQ----EVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIKM 748 + S AE Q + K G K+ E+SK+ + +P A ++ P++ PK + + +K++ F +PVDP+KLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P + +MA+ + S + M Sbjct: 90 TGSGAEDEQQGLKKEEGGQGTKQEDLDENSKQELPMEVPKEPAPAPPPEPDMNNLPQNPIPKHQQ---KHALLAIKAVKRLKDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGPNAGISQMARNIQASFEKHM 251
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: GCN5_SCHPO (Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe GN=gcn5 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12 Identity = 40/116 (34.48%), Postives = 57/116 (49.14%), Query Frame = 2 Query: 401 QEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIKM 748 +E+ E K RPK V ++ + HP+ W F +PV K D+PDY+ +I PMDL T++ RL N Y +EF+ D + F N YN +K A L K K+ Sbjct: 334 KEMEELSKKPRPKPFFAVLE---MLFTEMQNHPSSWPFMQPVS--KEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNTTYYKNADRLEKFFQKKL 444
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: GCN5_ASHGO (Histone acetyltransferase GCN5 OS=Ashbya gossypii GN=GCN5 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12 Identity = 34/93 (36.56%), Postives = 52/93 (55.91%), Query Frame = 2 Query: 473 ILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIKME 751 +L L H A W F +PV+ + ++PDY+ I +PMDL T++ +L+ N Y ++F+ D RL F+N YN K A L K + KM+ Sbjct: 352 VLTELQNHAAAWPFLQPVN--RDEVPDYYEFIKEPMDLSTMEIKLENNRYEKMEDFIYDARLIFNNCRAYNGENTSYFKYANRLEKFFNTKMK 442
BLAST of CX296720 vs. ExPASy Swiss-Prot
Match: GCN5_DEBHA (Histone acetyltransferase GCN5 OS=Debaryomyces hansenii GN=GCN5 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11 Identity = 33/93 (35.48%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 473 ILKSLMMHPAGWVFNRPVDPMKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEKYVHKMAQELNKSLDIKME 751 +L L HP+ W F+ PV+ K ++ DY+ +I +PMDL T++++L+ + Y D+F+ D RL F+N YN K A +L K ++ K++ Sbjct: 354 LLSELTNHPSAWPFSTPVN--KEEVGDYYDVIKEPMDLSTMESKLENDKYDSFDQFLYDARLIFNNCRSYNADSTTYFKNATKLEKFMNNKIK 444 The following BLAST results are available for this feature:
BLAST of CX296720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296720 ID=CX296720; Name=CX296720; organism=Citrus clementina; type=EST; length=754bpback to top |