CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12872 contig Ccv1_Contig12872:500..1223. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH1_BACSU (Probable aldehyde dehydrogenase ycbD OS=Bacillus subtilis GN=ycbD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.769e-35
Identity = 84/245 (34.29%), Postives = 132/245 (53.88%), Query Frame = 1
Query:   22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGM---IPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC-------QEYRREGNLIWPLLLDNVRPDMRI 723
            T+ +PLGVV  I P+N+PV + + K+APAL+ GN++V+KP T+ AV    ++ CF  AG P G+I+ VTG GS +G  L  H  VN ++FTG +    I  +A +      Q+E+GGK+  IV +DADL+  A  +I G F  +GQ+CTA   V+V   + +            +T+G   +E   + P+ S++  +     +   KQ+GA+             + G  + P + DNV  +M I
Sbjct:  142 TTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVIKPATETAVTCAKIIACFEEAGLPAGVINLVTGPGSVVGQGLAEHDGVNAVTFTGSNQVGKIIGQAALARGAKYQLEMGGKNPVIVADDADLEAAAEAVITGAFRSTGQKCTATSRVIVQSGIYERFKEKLLQRTKDITIGDSLKEDVWMGPIASKNQLDNCLSYIEKGKQEGASLLIGGEKLENGKYQNGYYVQPAIFDNVTSEMTI 386          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: LADH_METMP (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis GN=MMP1487 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.840e-35
Identity = 85/232 (36.64%), Postives = 131/232 (56.47%), Query Frame = 1
Query:   22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMV----HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLD 699
            T   PLGV+ AI PFN+P+NLA  KI PA+  GNS+VL P ++  + A+++     H       P+G+ +  TG G  +GD ++ +  VN +SFTG  + G SISK A M  + +ELGG +  IVL+D+D+ L A + +K  F  +GQ C +V  VLV E V ++           L +G P +++ DI P++S  SA  IE L+  +  +G        R+ +LI P +++
Sbjct:  125 TKKEPLGVIGAITPFNFPLNLATHKIGPAIATGNSVVLHPSSKAPIVAIYLTKIIEHVLKQMDIPRGVFNLATGNGEIVGDEISKNDNVNMVSFTGSVEVGESISKNAKMKKVTLELGGNNPMIVLKDSDIKLAAKSAVKSKFLNAGQVCISVGQVLVEEEVVETFTKYVIEETKKLILGNPLDKNTDIGPLISPESALRIENLIKQSVSEGGELLIGGNRQNSLISPAVIN 356          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: LADH_METJA (Lactaldehyde dehydrogenase OS=Methanocaldococcus jannaschii GN=MJ1411 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.572e-34
Identity = 85/232 (36.64%), Postives = 129/232 (55.60%), Query Frame = 1
Query:   22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLD 699
            T   P+G+V AI PFN+P+NL+  KIAPA+  GN +V  P ++  +  + +      A      P G+ + +TG G  +GD + ++  VN ISFTG    G  I+KKAG   + +ELGG +  IVL+DADL+     +IKG F Y+GQ C +V ++LV ES+AD            L VG P +E  D+ P++S   A ++E +V  A  +G       +R+  L +P +L+
Sbjct:  125 TRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTILE 356          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH_BACST (Aldehyde dehydrogenase, thermostable OS=Bacillus stearothermophilus GN=aldHT PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.572e-34
Identity = 87/248 (35.08%), Postives = 132/248 (53.23%), Query Frame = 1
Query:   22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPL------QMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR--EGNL-----IWPLLLDNVRPDMRI 723
            T+ +PLGVV  I P+N+PV + + K+APAL+ GN++VLKP ++ AV A  ++ CFH AGFPKG+++ V G GS +G  +  HP ++ ++FTG +T   + K+ G          Q+E+GGK+  IV +DADLDL     I GG   +GQ+CTA   V +   V +            L +G   +    + P  SES  + +   +   K +GA       R  EG L     + P + ++V   M I
Sbjct:  142 TTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVLKPASETAVTAAKVIECFHEAGFPKGVVNMVCGSGSVVGQGIANHPDIDGVTFTGSNT---VGKQVGRAAFERGAKYQLEMGGKNPVIVAKDADLDLAVEGTISGGLRSTGQKCTATSRVFIEREVYEPFKAKLLERVKQLKIGNGLDAETWMGPCASESQFHTVLSYIEKGKSEGAKLIYGGNRCLEGELANGFFVEPTIFEDVDLQMTI 386          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: LADH_METM5 (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0090 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.667e-33
Identity = 84/232 (36.21%), Postives = 128/232 (55.17%), Query Frame = 1
Query:   22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMV----HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLD 699
            T   PLGVV AI PFN+P+NL   KI PA+  GNS+VL P ++  + A+++     H       P+G+ +  TG G  +GD ++ +  +N +SFTG  + G SISK A M  + +ELGG +  IVL+D+D+ L A + +K  F  +GQ C +V  VLV E V ++           L +G P +   DI P++S  SA  IE L+  +  +G        R+ +LI P +++
Sbjct:  125 TKKEPLGVVGAITPFNFPLNLITHKIGPAIATGNSVVLHPSSKAPIVAIYLTKIIEHVLKQMDVPRGIFNLATGNGDIVGDEISKNDNINMVSFTGSVEVGESISKNAKMKKVALELGGNNPMIVLKDSDIKLAAKSAVKSKFLNAGQVCISVGQVLVEEEVLETFTKHVIEETKKLILGNPLDTKTDIGPLISPESALRIENLIKKSVNEGGEVLIGGNRQNSLISPAVIN 356          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.843e-32
Identity = 89/239 (37.24%), Postives = 125/239 (52.30%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI--PLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ-----EYRREGNLIWPLLLDNVRPDMRI 723
            PLGVV  I P+NYP+ +AV K+AP+L AG + +LKP    +V  L +       G P G+++ +TG GSE G  L  HP V+ I+FTG   TG  +   A  +  P+ MELGGK   IV +D DLD  A   + G F  +GQ C+A   +LV ES+A             + +  P EE C + PVVS+     I   +  AK +GAT        E+  +G  I P ++ +V   M+I
Sbjct:  151 PLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASVTCLELADICREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFATGSKVMTAAAQLVKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLVHESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHGGSRPEHLEKGFFIEPTIITDVTTSMQI 389          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_ANOFW (1-pyrroline-5-carboxylate dehydrogenase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rocA PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.407e-32
Identity = 87/243 (35.80%), Postives = 131/243 (53.91%), Query Frame = 1
Query:   31 IPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKG--ATFCQEYRREGNLIWPLLLDNVRPDMRI 723
            IPLGV + I P+N+P  +       AL+ GN+++LKP +   V A   V     AG P G+++ + G G+E+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKD  +V ++ADL+L A +I+   F +SGQ+C+A   V+ +E V D +          L VG PEE S  + PV+ +S+ N I   +   KQ+G   T  +    +G  I P +  ++ P  RI
Sbjct:  170 IPLGVGVVISPWNFPFAIMAGTTVAALVTGNTVLLKPASATPVVAYKFVEVLEEAGLPAGVLNYIPGSGAEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVHPGQIWLKRVIAEMGGKDTIVVDKEADLELAAQSIVASAFGFSGQKCSACSRVVALEDVYDQVLNRVVELTKQLKVGNPEEQSTFMGPVIDQSAYNKIMEYIEIGKQEGKLMTGGEGDDSKGFFIQPTVFADLDPKARI 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_GEOKA (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus kaustophilus GN=rocA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.106e-32
Identity = 84/243 (34.57%), Postives = 133/243 (54.73%), Query Frame = 1
Query:   31 IPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG--ATFCQEYRREGNLIWPLLLDNVRPDMRI 723
            IPLGV + I P+N+P  +       +L+ GN+++LKP +   V A   V     AG P G+++ + G G+E+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKDA +V ++ADL+L A +I+   F +SGQ+C+A    +++E V D +          L VG P E++  + PV+ +++ N I   +   KQ+G   T  +    +G  I P +  +V P+ RI
Sbjct:  170 IPLGVGVVISPWNFPFAIMAGTTVASLVTGNTVLLKPASATPVVAYKFVEVLEEAGLPAGVLNYIPGSGAEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVHPGQIWLKRVIAEMGGKDAIVVDKEADLELAAQSIVASAFGFSGQKCSACSRAIIVEDVYDQVLSRVVELTKQLNVGDPAEQATFMGPVIDQNAYNKIMEYIEIGKQEGRLMTGGEGDDAKGFFIQPTVFADVDPNARI 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_GEOTN (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rocA PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.363e-32
Identity = 84/243 (34.57%), Postives = 131/243 (53.91%), Query Frame = 1
Query:   31 IPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG--ATFCQEYRREGNLIWPLLLDNVRPDMRI 723
            IPLGV + I P+N+P  +       AL+ GN+++LKP +   V A         AG P G+++ + G G+E+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKDA +V ++ADL+L A +I+   F +SGQ+C+A    +++E V D +          L VG P E++  + PV+ + + N I   +   KQ+G   T  +    +G  I P +  +V P+ RI
Sbjct:  170 IPLGVGVVISPWNFPFAIMAGTTVAALVTGNTVLLKPASATPVVAYKFAEVLEEAGLPAGVLNYIPGSGAEVGDYLVEHPRTRFISFTGSRDVGIRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDKEADLELAAQSIVASAFGFSGQKCSACSRAIIVEDVYDQVLNRVVELTKQLNVGDPAEQATFMGPVIDQGAYNKIMEYIEIGKQEGRLMTGGEGDDSKGFFIQPTVFADVDPNARI 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BADH_AMAHP (Betaine aldehyde dehydrogenase, chloroplastic OS=Amaranthus hypochondriacus GN=BADH4 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.363e-32
Identity = 86/245 (35.10%), Postives = 125/245 (51.02%), Query Frame = 1
Query:   16 CLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMI--PLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC-----QEYRREGNLIWPLLLDNVRPDMRI 723
            C     P+GVV  I P+NYP+ +A  K+APAL AG S VLKP    +V  L +       G P G+++ +TG G E G  L  HP V+ ++FTG   TG  +   A  +  P+ +ELGGK   ++ ED DLD  A     G F  +GQ C+A   +LV ES+A             + +  P EE C + PVVS+S    +   +  AK +GAT        E+ ++G  + P ++ +V   M+I
Sbjct:  145 CHVLKQPIGVVGLISPWNYPLLMATWKVAPALAAGCSAVLKPSELASVTCLELAEVCREVGLPPGVLNILTGLGPEAGGPLACHPDVDKVAFTGSTATGSKVMSSAAQLVKPVTLELGGKSPIVIFEDVDLDKAAEWTAFGCFWTNGQICSATSRLLVHESIAAEFLDRLVKWCKNIKISDPFEEGCRLGPVVSKSQYEKVLKFISTAKSEGATILCGGSRPEHLKKGYYVEPTIISDVSTSMQI 389          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH1_BACSU6.769e-3534.29Probable aldehyde dehydrogenase ycbD OS=Bacillus s... [more]
LADH_METMP8.840e-3536.64Lactaldehyde dehydrogenase OS=Methanococcus maripa... [more]
LADH_METJA2.572e-3436.64Lactaldehyde dehydrogenase OS=Methanocaldococcus j... [more]
ALDH_BACST2.572e-3435.08Aldehyde dehydrogenase, thermostable OS=Bacillus s... [more]
LADH_METM51.667e-3336.21Lactaldehyde dehydrogenase OS=Methanococcus maripa... [more]
BADH1_ARATH1.843e-3237.24Betaine aldehyde dehydrogenase 1, chloroplastic OS... [more]
ROCA_ANOFW2.407e-3235.801-pyrroline-5-carboxylate dehydrogenase OS=Anoxyba... [more]
ROCA_GEOKA4.106e-3234.571-pyrroline-5-carboxylate dehydrogenase OS=Geobaci... [more]
ROCA_GEOTN5.363e-3234.571-pyrroline-5-carboxylate dehydrogenase OS=Geobaci... [more]
BADH_AMAHP5.363e-3235.10Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
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