CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.047e-27
Identity = 83/245 (33.88%), Postives = 121/245 (49.39%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723
            +  T   P+GV   I P+N P+ +   K+ PAL  GN++V+KP  Q  + ALHM      AGFP G+++ V G G   G  ++ H  ++ +SFTG  + G  I + AG   L+   +ELGGK  CIV  DADLD       +G F + GQ C A   + V ES+ D              +G P  S  +  P + +   N I GL+   K++GA   C    +  +G  + P +  NV  +MRI
Sbjct:  152 FTYTRREPIGVCGQIIPWNGPLIIFTWKLGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGGAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRI 396          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: Y4UC_RHISN (Putative aldehyde-dehydrogenase-like protein y4uC OS=Rhizobium sp. (strain NGR234) GN=NGR_a01370 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.367e-27
Identity = 75/224 (33.48%), Postives = 113/224 (50.45%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLD 699
            PLG++ AI P+N P+NL   K+ PA+  GN+++LKP      +A+ +V     AG P+ +I+   G   E+   +     V  +SFTGG  TG +IS+ AG+  L MELGG    IV+ D D D      + G F  +GQ C   + +L+   +              L  G P +E  D+ P++S+  A   E  V +A + GAT      REG+L  P +L+
Sbjct:  180 PLGIITAITPYNDPLNLVAHKLGPAIAGGNAVMLKPSNLTPFSAIKLVGALREAGLPEEVITISHG-DRELVTAMIAAREVRMVSFTGGFATGEAISRAAGLKKLAMELGGNAPVIVMNDCDFDKAVEGCVSGAFWAAGQNCIGAQRILIQSELYGRFRDAFVAATKKLKAGDPLQEDTDVGPMISKQVAERTEAAVNEAIKAGATLLCGNYREGSLYHPTVLE 402          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACLD (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rocA PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.367e-27
Identity = 73/224 (32.59%), Postives = 116/224 (51.79%), Query Frame = 1
Query:    1 ERTKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI--------PLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESCDI--TPVVSESSANFIEGLVMDAKQKG 639
            ER +Y  T   P GV + IPP+N+   +        ++ GN++VLKP +   V A   V     +G PKG+++ V G G+E+GD+L  HP  + I+FTG  + G  I ++A  +         +  E+GGKD  +V ED D++L A +I    F ++GQ+C+A    +V E V D +            VG P +S D+   PV+ ++S N I   +   K++G
Sbjct:  164 ERNQYVYT---PTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEP-DSADVYMGPVIDQASFNKIMDYIEIGKEEG 383          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.367e-27
Identity = 81/251 (32.27%), Postives = 122/251 (48.61%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA-------TFCQEYRREGNLIWPLLLDNVRPDMRI 723
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP    ++ AL +   +  AG P G+ + +TG G  +G  LT HP +  +SFTGG  +G ++   A    L+   MELGGK   I+ +DADLD  A   +   F  SGQ CT    V V +++              +  G P +ES +  P+VS      +   +   K++GA               +G  + P +  + R DM+I
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGTGKSVGQALTTHPGIAKVSFTGGIASGKTVMANAAGSTLKDVTMELGGKSPLIIFDDADLDKAADIAMMANFFSSGQVCTNGTRVFVPKALQAQFEEKILACVQRIRAGDPTDESVNFGPLVSFPHRESVLRYIESGKREGARVLVGGEPMTDGDYAQGAYVAPTVFTDCRDDMKI 383          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.367e-27
Identity = 78/217 (35.94%), Postives = 108/217 (49.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT-AVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGA 642
            + +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + V G G EIG +LT HP +  ISFTGG +TG  +   A    L+   MELGGK   I+ EDADL+  A   +   F  SGQ CT   +V +    +AD            L   P  E  +  P+ S      +   +   KQ+GA
Sbjct:  133 SSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRILIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGA 349          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.367e-27
Identity = 78/217 (35.94%), Postives = 108/217 (49.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642
            + +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + V G G EIG +LT HP +  ISFTGG +TG  +   A    L+   MELGGK   I+ EDADL+  A   +   F  SGQ CT    V V +S               + +G P  E  +  P+ S      +   +   KQ+GA
Sbjct:  133 SSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGA 349          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_BURXL (Betaine aldehyde dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=betB PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.785e-27
Identity = 83/251 (33.07%), Postives = 117/251 (46.61%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESC-DITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRI 723
            T +  T   PLGV   I  +NYP+ +A  K APAL AGN+++ KP     ++AL +   +  AG P G+ + V G G  +G  L  HP +  ISFTGG +TG  +   AG   L+   MELGGK   +V +DADL+  A   +   F  SGQ CT    V V   V +            + VG P  +  +  P+ S +    + G +   KQ+GA      +R        G  + P +      DMRI
Sbjct:  133 TSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEITPLSALKLAEIYTEAGVPAGVFNVVQGDG-RVGAMLAAHPDIEKISFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLLVFDDADLERAADIAMSANFFSSGQVCTNGTRVFVQRGVLERFEALVLERVKRIRVGAPTNAATNFGPLASAAQLQKVLGYIESGKQEGARLMAGGKRLTEGHFGNGQYVEPTVFTGCHDDMRI 382          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.332e-27
Identity = 79/249 (31.73%), Postives = 122/249 (49.00%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGAT-------FCQEYRREGNLIWPLLLDNVRPDMRI 723
            +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP    ++ AL +   +  AG P G+ + +TG G ++G  LT HP +  +SFTGG  +G  +   A    L+   MELGGK   I+  D DLD  A   +   F  SGQ CT    V V +++  +           + +G P +E  +  P+VS    + +   +   K++GAT         +     G  + P +  + R DM+I
Sbjct:  135 FVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADVDLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERVNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGCSLTEGALAHGAYVAPTVFTHCRDDMQI 383          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_YERPP (Betaine aldehyde dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=betB PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.332e-27
Identity = 80/249 (32.13%), Postives = 123/249 (49.40%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGAT-------FCQEYRREGNLIWPLLLDNVRPDMRI 723
            +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP    ++ AL +   +  AG P G+ + +TG G ++G  LT HP +  +SFTGG  +G  +   A    L+   MELGGK   I+  DADLD  A   +   F  SGQ CT    V V +++  +           + +G P +E  +  P+VS    + +   +   K++GAT         +     G  + P +  + R DM+I
Sbjct:  135 FVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQI 383          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_YERPN (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=betB PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.332e-27
Identity = 80/249 (32.13%), Postives = 123/249 (49.40%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGAT-------FCQEYRREGNLIWPLLLDNVRPDMRI 723
            +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP    ++ AL +   +  AG P G+ + +TG G ++G  LT HP +  +SFTGG  +G  +   A    L+   MELGGK   I+  DADLD  A   +   F  SGQ CT    V V +++  +           + +G P +E  +  P+VS    + +   +   K++GAT         +     G  + P +  + R DM+I
Sbjct:  135 FVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQI 383          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL1A7_MOUSE1.047e-2733.88Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
Y4UC_RHISN1.367e-2733.48Putative aldehyde-dehydrogenase-like protein y4uC ... [more]
ROCA_BACLD1.367e-2732.591-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
BETB_ERWCT1.367e-2732.27Betaine aldehyde dehydrogenase OS=Erwinia carotovo... [more]
BETB_ACIBS1.367e-2735.94Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC1.367e-2735.94Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_BURXL1.785e-2733.07Betaine aldehyde dehydrogenase OS=Burkholderia xen... [more]
BETB_YERPY2.332e-2731.73Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPP2.332e-2732.13Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPN2.332e-2732.13Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]

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Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
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