CX296726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_YERPE (Betaine aldehyde dehydrogenase OS=Yersinia pestis GN=betB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.332e-27 Identity = 80/249 (32.13%), Postives = 123/249 (49.40%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGAT-------FCQEYRREGNLIWPLLLDNVRPDMRI 723 + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP ++ AL + + AG P G+ + +TG G ++G LT HP + +SFTGG +G + A L+ MELGGK I+ DADLD A + F SGQ CT V V +++ + + +G P +E + P+VS + + + K++GAT + G + P + + R DM+I Sbjct: 135 FVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_YERPB (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=betB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.332e-27 Identity = 80/249 (32.13%), Postives = 123/249 (49.40%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGAT-------FCQEYRREGNLIWPLLLDNVRPDMRI 723 + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP ++ AL + + AG P G+ + +TG G ++G LT HP + +SFTGG +G + A L+ MELGGK I+ DADLD A + F SGQ CT V V +++ + + +G P +E + P+VS + + + K++GAT + G + P + + R DM+I Sbjct: 135 FVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_YERPA (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=betB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.332e-27 Identity = 80/249 (32.13%), Postives = 123/249 (49.40%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGAT-------FCQEYRREGNLIWPLLLDNVRPDMRI 723 + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP ++ AL + + AG P G+ + +TG G ++G LT HP + +SFTGG +G + A L+ MELGGK I+ DADLD A + F SGQ CT V V +++ + + +G P +E + P+VS + + + K++GAT + G + P + + R DM+I Sbjct: 135 FVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB2_RHIME (Betaine aldehyde dehydrogenase 2 OS=Rhizobium meliloti GN=betB2 PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.332e-27 Identity = 75/211 (35.55%), Postives = 112/211 (53.08%), Query Frame = 1 Query: 22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTG--ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642 T PLGV L I +NYP+ +A K APAL GN+++ KP ++AL + AG P G+ + V G G ++G L HPA+ +S TG TG ++ + AG+ P+ MELGGK A IV +DAD++ + I G F +GQ C+ V + + ++ L +G P +E DI P+VS + N + V A+ +GA Sbjct: 140 TRREPLGVCLGIGAWNYPIQIAAWKAAPALACGNAMIFKPSEVTPLSALKLAEILTEAGLPPGVFNIVQGAG-DVGAELATHPAIAKVSLTGSVKTGARVASAAMAGIRPVTMELGGKSALIVFDDADVEAAVSGAILGNFYSAGQICSNGTRVFLQRGIREAFLARLLARVAALKIGDPMDEETDIGPLVSAAHRNRVATYVARAEVEGA 349
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACP2 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus pumilus (strain SAFR-032) GN=rocA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.977e-27 Identity = 81/253 (32.02%), Postives = 123/253 (48.62%), Query Frame = 1 Query: 1 ERTKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXXLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKG--ATFCQEYRREGNLIWPLLLDNVRPDMRI 723 E +Y T P GV L IPP+N+ + ++ GN++VLKP + V A V AG PKG+++ V G G+E+GD+L HP + I+FTG + G I ++A + P Q E+GGKD +V EDAD++L A I F +SGQ+C+A +V E + D + T P + PV+ ++S + I + KQ+G T EG I P + ++ P R+ Sbjct: 163 EHNQYVYT---PTGVTLVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASATPVIAARFVEELEQAGLPKGVVNFVPGSGAEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQQHLKRVIAEMGGKDTVVVDEDADVELAANAIFTSAFGFSGQKCSAGSRAVVHEKLYDQVIERVKEITETKTTANPLSADVYMGPVIDQASFDKITDYIEVGKQEGRLVTGGTSDDTEGYFIHPTVFADLEPTSRL 412
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.977e-27 Identity = 83/226 (36.73%), Postives = 114/226 (50.44%), Query Frame = 1 Query: 22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA--TFCQEYRREGNL 678 T + PLGVV AI +NYP+ +A+ K APAL AGN+++ KP + AL + F AG P G+ + + G G+ +G LT HP + ISFTGG TG + A L+ MELGGK IV DADLDL A + F SGQ CT V V ++ + + +G P +E P+VS + + + K +GA F E R+G L Sbjct: 138 TRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLFGGERLRDGAL 363
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5) HSP 1 Score: 121.324 bits (303), Expect = 5.195e-27 Identity = 81/245 (33.06%), Postives = 120/245 (48.98%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723 + T P+GV I P+N+P+ + + KI PAL GN++V+KP Q + ALH+ AGFP G+++ V G G G ++ H V+ ++FTG G I + AG L+ +ELGGK CIV DADLD+ G F + GQ C A + V ESV D +G P + P + + + I L+ K++GA C + +G + P + NV +MRI Sbjct: 152 FTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRI 396
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_RHIL3 (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=betB PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.784e-27 Identity = 77/247 (31.17%), Postives = 117/247 (47.37%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTG--ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRI 723 + T +PLGV + I +NYP +A K APAL+ GN++V KP + AL + H AG PKGL + + G + G L HP V +S TG TG ++ + + + MELGGK +V +DADLD + G F +GQ C+ V V +++ D + +G P +E+ + P+VS + + + K +GAT EG + P + +V DM I Sbjct: 135 FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVCGNAMVFKPSENTPLGALKIAEILHEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRRVAAAAAGNLKHVTMELGGKSPLVVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKTIKDEFLKRLKVRTEAMLIGDPMDEATQVGPMVSWAQREKVISYIEKGKAEGATLIAGGGIPNNVSGEGYYVQPTVFADVTDDMTI 380
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.860e-27 Identity = 80/249 (32.13%), Postives = 122/249 (49.00%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGAT-------FCQEYRREGNLIWPLLLDNVRPDMRI 723 + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP ++ AL + + AG P G+ + +TG G ++G LT HP + +SFTGG +G + A L+ MELGGK I+ DADLD A + F SGQ CT V V ++ + + +G P +E + P+VS + + + K++GAT + G + P + + R DM+I Sbjct: 135 FVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPLALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.860e-27 Identity = 78/212 (36.79%), Postives = 108/212 (50.94%), Query Frame = 1 Query: 22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642 T + PLGVV AI +NYP+ +A+ K APAL AGN+++ KP + AL + F AG P G+ + + G G+ +G LT HP + ISFTGG TG + A L+ MELGGK IV DADLDL A + F SGQ CT V V ++ + + +G P +E P+VS + + + K +GA Sbjct: 138 TRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGA 349 The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bpback to top |