CX296726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.860e-27 Identity = 78/212 (36.79%), Postives = 108/212 (50.94%), Query Frame = 1 Query: 22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642 T + PLGVV AI +NYP+ +A+ K APAL AGN+++ KP + AL + F AG P G+ + + G G+ +G LT HP + ISFTGG TG + A L+ MELGGK IV DADLDL A + F SGQ CT V V ++ + + +G P +E P+VS + + + K +GA Sbjct: 138 TRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGA 349
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.860e-27 Identity = 78/212 (36.79%), Postives = 108/212 (50.94%), Query Frame = 1 Query: 22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642 T + PLGVV AI +NYP+ +A+ K APAL AGN+++ KP + AL + F AG P G+ + + G G+ +G LT HP + ISFTGG TG + A L+ MELGGK IV DADLDL A + F SGQ CT V V ++ + + +G P +E P+VS + + + K +GA Sbjct: 138 TRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLKEVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFVPRALRHAFEARLLARVQRIHIGDPLDERTTFGPLVSAAHMQRVLEHIEQGKAEGA 349
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA2_BACSU (1-pyrroline-5-carboxylate dehydrogenase 2 OS=Bacillus subtilis GN=ycgN PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.157e-26 Identity = 73/223 (32.74%), Postives = 114/223 (51.12%), Query Frame = 1 Query: 1 ERTKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXXLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKG 639 E+ +Y T P GV + IPP+N+ + ++ GN++VLKP + V A V +G PKG+++ V G G+E+GD+L HP + I+FTG + G I ++A + P Q E+GGKD +V EDAD++L A +I F ++GQ+C+A +V E V D L +T P + PV+ + S + I + KQ+G Sbjct: 163 EKNQYVYT---PTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASATPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQQHLKRVIAEMGGKDTVVVDEDADIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDQVLERVIEITESKVTAKPDSADVYMGPVIDQGSYDKIMSYIEIGKQEG 382
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.157e-26 Identity = 82/251 (32.67%), Postives = 116/251 (46.22%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRI 723 + + T PLGVV I +NYP+ +A+ K APAL AGN++V KP + A+ + + AG P G+ + V G G EIG +LT HP + ISFTGG TG + A L+ MELGGK ++ +DADLD A + F SGQ CT V V S+ + + +G P + P+ S + + K +GA R G + P + + R DM I Sbjct: 133 SSFFYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGVPAGVFNVVQGPGREIGQWLTEHPVIEKISFTGGVATGKKVMASAASSSLKEVTMELGGKSPLVICDDADLDRAADIAVMANFFSSGQVCTNGTRVFVPRSMLAAFEAAVVERVKRIRIGDPMAAETNFGPLTSFPHMENVLRYIESGKAEGARLLTGGGRATEGALANGAYVLPTVFSDCRDDMTI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.157e-26 Identity = 82/251 (32.67%), Postives = 116/251 (46.22%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRI 723 + + T PLGVV I +NYP+ +A+ K APAL AGN++V KP + A+ + + AG P G+ + V G G EIG +LT HP + ISFTGG TG + A L+ MELGGK ++ +DADLD A + F SGQ CT V V S+ + + +G P + P+ S + + K +GA R G + P + + R DM I Sbjct: 133 SSFFYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGVPAGVFNVVQGPGREIGQWLTEHPVIEKISFTGGVATGKKVMASAASSSLKEVTMELGGKSPLVICDDADLDRAADIAVMANFFSSGQVCTNGTRVFVPRSMLAAFEAAVVERVKRIRIGDPMAAETNFGPLTSFPHMENVLRYIESGKAEGARLLTGGGRATEGALANGAYVLPTVFSDCRDDMTI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_RHILW (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=betB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.157e-26 Identity = 80/247 (32.39%), Postives = 116/247 (46.96%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTG--ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRI 723 + T +PLGV + I +NYP +A K APALI+GN++V KP + AL + H AG PKGL + + G + G L HP V +S TG TG ++ + + + MELGGK IV +DADLD + G F +GQ C+ V V + + + +G P +E+ I P+VS + + + K +GAT EG I P + +V DM I Sbjct: 135 FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALISGNAMVFKPSENTPLGALKIAEILHEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRRVAAAAAGNLKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDPLDEATQIGPMVSWAQREKVVAYIEKGKAEGATLVAGGGIPNNVSGEGYYIQPTVFADVTDDMTI 380
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ACIAD (Betaine aldehyde dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.157e-26 Identity = 80/251 (31.87%), Postives = 120/251 (47.81%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRI 723 + + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP + A + + AG P G+ + V G G EIG +LT H + ISFTGG +TG + A L+ MELGGK I+ EDA+LD A + F SGQ CT V + + + + + +G P+ + + P+VS + + KQ+GA R +G + P + + DM+I Sbjct: 133 SSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTAFKLAEIYSEAGLPAGVFNVVQGAGREIGQWLTEHAVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDANLDRAADIAVMANFFSSGQVCTNGTRVFIPQRLKAAFEQAVVERVKRIRMGDPQHTDTNFGPLVSFPHMEKVLSYIESGKQQGAKVLIGGERATTGLLAQGAYVQPTVFTDCHDDMKI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 1.157e-26 Identity = 80/245 (32.65%), Postives = 121/245 (49.39%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723 + T + P+GV I P+N+P+ + + KI PAL GN++V+KP Q + ALH+ AGFP G+++ V G G G ++ H ++ ++FTG + G I + AG L+ +ELGGK CIVL DADLD G F + GQ C A + V ES+ D +G P P + + + I L+ K++GA C + +G + P + NV +MRI Sbjct: 152 FTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGATQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFSNVTDEMRI 396
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.511e-26 Identity = 80/245 (32.65%), Postives = 121/245 (49.39%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723 + T + P+GV I P+N+P+ + + KI PAL GN++V+KP Q + ALH+ AGFP G+++ V G G G ++ H ++ ++FTG + G I + AG L+ +ELGGK CIVL DADLD G F + GQ C A + V ES+ D +G P P + + + I L+ K++GA C + +G + P + NV +MRI Sbjct: 152 FTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFSNVTDEMRI 396
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: GABD2_MYCTU (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium tuberculosis GN=gabD2 PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 1.974e-26 Identity = 84/238 (35.29%), Postives = 123/238 (51.68%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNC--ISFTGGD-TGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIW-PLLLDNVRPDM 717 P GVV I P+NYP+ L VS PAL+AGN++VLKP +Q AL + AG P+ L + V G GS +G +T NC + FTG TG +++ AG +I ELGGK+ IV A+LD VA + FS +GQ C +++ + V + +A+ + +G + S D+ ++SE+ + G V DA KGA + G L + P +L NV P+M Sbjct: 147 PKGVVGVISPWNYPMTLTVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAIT----DNCDYLMFTGSSATGSRLAEHAGRRLIGFSAELGGKNPMIVARGANLDKVAKAATRACFSNAGQLCISIERIYVEKDIAEEFTRKFGDAVRNMKLGTAYDFSVDMGSLISEAQLKTVSGHVDDATAKGAKVIAGGKARPDIGPLFYEPTVLTNVAPEM 380 The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bpback to top |