CX296726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: GABD2_MYCTA (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=gabD2 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.974e-26 Identity = 84/238 (35.29%), Postives = 123/238 (51.68%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNC--ISFTGGD-TGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIW-PLLLDNVRPDM 717 P GVV I P+NYP+ L VS PAL+AGN++VLKP +Q AL + AG P+ L + V G GS +G +T NC + FTG TG +++ AG +I ELGGK+ IV A+LD VA + FS +GQ C +++ + V + +A+ + +G + S D+ ++SE+ + G V DA KGA + G L + P +L NV P+M Sbjct: 147 PKGVVGVISPWNYPMTLTVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAIT----DNCDYLMFTGSSATGSRLAEHAGRRLIGFSAELGGKNPMIVARGANLDKVAKAATRACFSNAGQLCISIERIYVEKDIAEEFTRKFGDAVRNMKLGTAYDFSVDMGSLISEAQLKTVSGHVDDATAKGAKVIAGGKARPDIGPLFYEPTVLTNVAPEM 380
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: GABD2_MYCBP (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=gabD2 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.974e-26 Identity = 84/238 (35.29%), Postives = 123/238 (51.68%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNC--ISFTGGD-TGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIW-PLLLDNVRPDM 717 P GVV I P+NYP+ L VS PAL+AGN++VLKP +Q AL + AG P+ L + V G GS +G +T NC + FTG TG +++ AG +I ELGGK+ IV A+LD VA + FS +GQ C +++ + V + +A+ + +G + S D+ ++SE+ + G V DA KGA + G L + P +L NV P+M Sbjct: 147 PKGVVGVISPWNYPMTLTVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAIT----DNCDYLMFTGSSATGSRLAEHAGRRLIGFSAELGGKNPMIVARGANLDKVAKAATRACFSNAGQLCISIERIYVEKDIAEEFTRKFGDAVRNMKLGTAYDFSVDMGSLISEAQLKTVSGHVDDATAKGAKVIAGGKARPDIGPLFYEPTVLTNVAPEM 380
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: GABD2_MYCBO (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium bovis GN=gabD2 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.974e-26 Identity = 84/238 (35.29%), Postives = 123/238 (51.68%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNC--ISFTGGD-TGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIW-PLLLDNVRPDM 717 P GVV I P+NYP+ L VS PAL+AGN++VLKP +Q AL + AG P+ L + V G GS +G +T NC + FTG TG +++ AG +I ELGGK+ IV A+LD VA + FS +GQ C +++ + V + +A+ + +G + S D+ ++SE+ + G V DA KGA + G L + P +L NV P+M Sbjct: 147 PKGVVGVISPWNYPMTLTVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAIT----DNCDYLMFTGSSATGSRLAEHAGRRLIGFSAELGGKNPMIVARGANLDKVAKAATRACFSNAGQLCISIERIYVEKDIAEEFTRKFGDAVRNMKLGTAYDFSVDMGSLISEAQLKTVSGHVDDATAKGAKVIAGGKARPDIGPLFYEPTVLTNVAPEM 380
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_VIBVU (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus GN=betB PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.974e-26 Identity = 73/216 (33.80%), Postives = 110/216 (50.93%), Query Frame = 1 Query: 10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTG--ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGAT 645 ++ T PLG+ I +NYP+ +A+ K APAL AGN+++ KP + ++AL + F AG P G+ + V G +G LT HP ++ +SFTG TG + A + P+ MELGGK I+ +DADLD + + F G+ CT V V ++ D+ L VG P I ++S+S + G + AK+ GAT Sbjct: 131 QFFYTRREPLGICAGIGAWNYPIQIAMWKAAPALAAGNAMIFKPSEETPLSALKLAELFTQAGVPDGVFNVVQG-DYRVGQMLTAHPEIDKVSFTGESGTGKKVMADSAATLKPVTMELGGKSPLIIFDDADLDDAVSAAMVANFYTQGEVCTHGTRVYVQRAMYDAFVEQLKERTEKLIVGDPMNMETQIGSLISKSHLEKVLGAISSAKESGAT 345
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_RHIEC (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=betB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.367e-26 Identity = 80/247 (32.39%), Postives = 117/247 (47.37%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTG--ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRI 723 + T +PLGV + I +NYP +A K APALI+GN++V KP + AL + H AG PKGL + + G + G L HP V +S TG TG ++ + + + MELGGK IV +DADLD + G F +GQ C+ V V ++V + +G P +E+ I P+VS + + + K +GAT EG + P + +V DM I Sbjct: 135 FAYTKRVPLGVCVGIGAWNYPQQIACWKGAPALISGNAMVFKPSENTPLGALKIAEILHEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRRVAAAAAGSLKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKAVKAEFLKRLKARTEAMLIGDPLDEATQIGPMVSWAQREKVIAYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDDMTI 380
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDA_STAAW (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MW2) GN=aldA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.367e-26 Identity = 72/207 (34.78%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA 642 P+GVV A+ +N+P+ LA KIAPA+ AGN++V++P + ++ L + F PKG+++ +TGKGSE G+ + H V+ +SFTG D G +++ A ++P +ELGGK A I+L+DA+LDL I G G+ C+A +LV E + D L + VG P +E+ + + + I+ + AK+ A Sbjct: 148 PIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGDPQDEATQMGSQTGKDQLDKIQSYIDAAKESDA 353
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDA_STAAS (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MSSA476) GN=aldA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.367e-26 Identity = 72/207 (34.78%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA 642 P+GVV A+ +N+P+ LA KIAPA+ AGN++V++P + ++ L + F PKG+++ +TGKGSE G+ + H V+ +SFTG D G +++ A ++P +ELGGK A I+L+DA+LDL I G G+ C+A +LV E + D L + VG P +E+ + + + I+ + AK+ A Sbjct: 148 PIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGDPQDEATQMGSQTGKDQLDKIQSYIDAAKESDA 353
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDA_STAAN (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain N315) GN=aldA PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.367e-26 Identity = 72/207 (34.78%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA 642 P+GVV A+ +N+P+ LA KIAPA+ AGN++V++P + ++ L + F PKG+++ +TGKGSE G+ + H V+ +SFTG D G +++ A ++P +ELGGK A I+L+DA+LDL I G G+ C+A +LV E + D L + VG P +E+ + + + I+ + AK+ A Sbjct: 148 PIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGDPQDEATQMGSQTGKDQLDKIQSYIDAAKESDA 353
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDA_STAAM (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=aldA PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.367e-26 Identity = 72/207 (34.78%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA 642 P+GVV A+ +N+P+ LA KIAPA+ AGN++V++P + ++ L + F PKG+++ +TGKGSE G+ + H V+ +SFTG D G +++ A ++P +ELGGK A I+L+DA+LDL I G G+ C+A +LV E + D L + VG P +E+ + + + I+ + AK+ A Sbjct: 148 PIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGDPQDEATQMGSQTGKDQLDKIQSYIDAAKESDA 353
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDA_STAAC (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain COL) GN=aldA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.367e-26 Identity = 72/207 (34.78%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA 642 P+GVV A+ +N+P+ LA KIAPA+ AGN++V++P + ++ L + F PKG+++ +TGKGSE G+ + H V+ +SFTG D G +++ A ++P +ELGGK A I+L+DA+LDL I G G+ C+A +LV E + D L + VG P +E+ + + + I+ + AK+ A Sbjct: 148 PIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGNPQDEATQMGSQTGKDQLDKIQSYIDAAKESDA 353 The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bpback to top |