CX296726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDA_STAA8 (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain NCTC 8325) GN=aldA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.367e-26 Identity = 72/207 (34.78%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA 642 P+GVV A+ +N+P+ LA KIAPA+ AGN++V++P + ++ L + F PKG+++ +TGKGSE G+ + H V+ +SFTG D G +++ A ++P +ELGGK A I+L+DA+LDL I G G+ C+A +LV E + D L + VG P +E+ + + + I+ + AK+ A Sbjct: 148 PIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGNPQDEATQMGSQTGKDQLDKIQSYIDAAKESDA 353
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDA_STAA3 (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain USA300) GN=aldA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.367e-26 Identity = 72/207 (34.78%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA 642 P+GVV A+ +N+P+ LA KIAPA+ AGN++V++P + ++ L + F PKG+++ +TGKGSE G+ + H V+ +SFTG D G +++ A ++P +ELGGK A I+L+DA+LDL I G G+ C+A +LV E + D L + VG P +E+ + + + I+ + AK+ A Sbjct: 148 PIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGNPQDEATQMGSQTGKDQLDKIQSYIDAAKESDA 353
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1A2_HUMAN (Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3) HSP 1 Score: 118.627 bits (296), Expect = 3.367e-26 Identity = 83/245 (33.88%), Postives = 122/245 (49.80%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723 + T + P+GV I P+N+P+ + KIAPAL GN++V+KP Q ++AL+M AGFP G+I+ + G G G + H ++ I+FTG + G I + AG L+ +ELGGK I+ DADLD +G F GQ CTA + V ES+ + VG P + + + P + + N I L+ +GA C + R+G I P + NV DMRI Sbjct: 169 FTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRI 413
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_VIBVY (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betB PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.397e-26 Identity = 73/216 (33.80%), Postives = 109/216 (50.46%), Query Frame = 1 Query: 10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTG--ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGAT 645 ++ T PLG+ I +NYP+ +A+ K APAL AGN+++ KP + ++AL + F AG P G+ + V G +G LT HP + +SFTG TG + A + P+ MELGGK I+ +DADLD + + F G+ CT V V ++ D+ L VG P I ++S+S + G + AK+ GAT Sbjct: 131 QFFYTRREPLGICAGIGAWNYPIQIAMWKAAPALAAGNAMIFKPSEETPLSALKLAELFTQAGVPDGVFNVVQG-DYRVGQMLTAHPEIAKVSFTGESGTGKKVMADSAATLKPVTMELGGKSPLIIFDDADLDDAVSAAMVANFYTQGEVCTHGTRVYVQRAMYDAFVEQLKERTEKLIVGDPMNMETQIGSLISKSHLEKVLGAISSAKESGAT 345
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_RHIE6 (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betB PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.397e-26 Identity = 79/247 (31.98%), Postives = 116/247 (46.96%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTG--ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRI 723 + T +PLGV + I +NYP +A K APALIAGN++V KP + AL + H AG PKGL + + G + G L HP V +S TG TG ++ + + + MELGGK IV +DADLD + G F +GQ C+ V V + + + +G P +E+ I P+VS + + + K +GAT EG + P + +V +M I Sbjct: 135 FAYTKRVPLGVCVGIGAWNYPQQIACWKGAPALIAGNAMVFKPSENTPLGALKIAEILHEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRRVAAAAAGSLKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDPMDEATQIGPMVSWAQREKVVAYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDEMTI 380
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.397e-26 Identity = 79/245 (32.24%), Postives = 121/245 (49.39%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISK---KAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723 + T + P+GV I P+N P+ L KI PAL GN++++KP Q + ALH+ AGFP G+++ V G G G ++ H V+ ++FTG + G I + K+ + + +ELG K+ CIV DADLD +G F+ GQ C A + V E++ D G P + P ++++ N I L+ K++GA C + +G I P + NV DMRI Sbjct: 152 FSYTRHEPIGVCGQIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEETIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTIFSNVTDDMRI 396
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDA_STAAB (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=aldA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.397e-26 Identity = 72/207 (34.78%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA 642 P+GVV A+ +N+P+ LA KIAPA+ AGN++V++P + ++ L + F PKG+++ +TGKGSE G+ + H V+ +SFTG D G +++ A ++P +ELGGK A I+L+DA+LDL I G G+ C+A +LV E + D L + VG P +E+ + + + I+ + AK+ A Sbjct: 148 PIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGDPQDEATQMGSQTGKDQLDKIQSYIDVAKESDA 353
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.397e-26 Identity = 82/245 (33.47%), Postives = 123/245 (50.20%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723 + T + P+GV I P+N+P+ + KIAPAL GN++V+KP Q ++AL+M AGFP G+++ + G G +G + H ++ I+FTG + G I + AG L+ +ELGGK I+ DADLD +G F GQ CTA + V ES+ + VG P + + + P + + N I L+ +GA C + R+G I P + NV DMRI Sbjct: 169 FTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGFGPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRI 413
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: GABD_DEIRA (Succinate-semialdehyde dehydrogenase [NADP+] OS=Deinococcus radiodurans GN=ssdA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.743e-26 Identity = 81/236 (34.32%), Postives = 120/236 (50.85%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMR 720 PLGV+L I P+NYP+ V AP L+ GN+++LK +AL + FH AG P+G + + + ++I + HPAV +S TG + G S+++ AG + +ELGG D IVL+ DLD G S +GQ C A K ++V++ + D G P + S + P+ SE +A ++ V DA KGAT Q G + P +L +V PDMR Sbjct: 132 PLGVLLGIEPWNYPLYQVVRFAAPNLVVGNTVLLKHSELCPQSALALEQLFHDAGVPQGAYTNLFLRIADIEQVIA-HPAVQGVSLTGSERAGASVAELAGRHLKKCVLELGGSDPFIVLDAEDLDTTVKAAATGRLSNTGQACIAAKRLMVVDDLYDEFVSRLGQTFSAFVPGDPADPSTRLGPLSSEQAARDLQAQVQDAIDKGATVVAGGQRPEHPGAFVQPTVLTDVTPDMR 366
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_XANAC (Betaine aldehyde dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=betB PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.743e-26 Identity = 76/212 (35.85%), Postives = 107/212 (50.47%), Query Frame = 1 Query: 22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642 T + PLGVV AI +NYP+ +A+ K APAL AGN+++ KP + AL + F AG P G+ + + G G+ +G LT HP + ISFTGG TG + A L+ MELGGK IV DADLD+ A + F SGQ CT V V ++ + + +G P +E P+ S + + + K +GA Sbjct: 138 TRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLKEVTMELGGKSPLIVCADADLDVAADIAMMANFYSSGQVCTNGTRVFVPRALRHAFEARLLARVQRIHIGDPLDERTTFGPLASAAHMQRVLEHIEQGKAEGA 349 The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bpback to top |