CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH3_YEAST (Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyces cerevisiae GN=ALD3 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.796e-26
Identity = 70/218 (32.11%), Postives = 110/218 (50.46%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG----GDTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXL-----TVGPPEESCDITPVVSESSANFIEGLVMDAKQK 636
            K+  T  +P GVV  I P+NYP+ +A  K+  AL AGN++++KP    +++ L+       AGFP G+++ + G GS +G  L  H  ++ ISFTG    G + +  S ++ +  + +E GGK   +V EDADLD     +  G F  SGQ CTA   V V  S+ D                     P +E C + PV+S +  + I+  +   K++
Sbjct:  150 KFAYTLKVPFGVVAQIVPWNYPLAMACRKMQGALAAGNTVIIKPAENTSLSLLYFATLIKKAGFPPGVVNVIPGYGSVVGKALGTHMDIDKISFTGSTKVGGSVLEASGQSNLKDITLECGGKSPALVFEDADLDKAIEWVANGIFFNSGQICTANSRVYVQSSIYDKFVEKFKETAKKEWDVAGKFDPFDEKCIVGPVISSTQYDRIKSYIERGKKE 367          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH2_YEAST (Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyces cerevisiae GN=ALD2 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.796e-26
Identity = 72/218 (33.03%), Postives = 109/218 (50.00%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG----GDTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXL-----TVGPPEESCDITPVVSESSANFIEGLVMDAKQK 636
            K+  T  +P GVV  I P+NYP+ +A  K+  AL AGN++++KP    +++ L+       AGFP G+++ V G GS +G  L  H  ++ ISFTG    G   +  S ++ +  + +E GGK   +V EDADLD     I  G F  SGQ CTA   V V  S+ D                     P +E C + PV+S +  + I+  +   K++
Sbjct:  150 KFAYTLKVPFGVVAQIVPWNYPLAMACWKLQGALAAGNTVIIKPAENTSLSLLYFATLIKKAGFPPGVVNIVPGYGSLVGQALASHMDIDKISFTGSTKVGGFVLEASGQSNLKDVTLECGGKSPALVFEDADLDKAIDWIAAGIFYNSGQNCTANSRVYVQSSIYDKFVEKFKETAKKEWDVAGKFDPFDEKCIVGPVISSTQYDRIKSYIERGKRE 367          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.796e-26
Identity = 81/245 (33.06%), Postives = 120/245 (48.98%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723
            +  T   P+GV   I P+N P+ L + KI  AL  GN++++KP  Q  + AL+M      AGFP G+++ V G GS  G  ++ H  ++ +SFTG  + G  I + AG   L+   +ELGGK  CIV  DADLD       +G F + GQ C A   + V ES+ D              +G P +S     P + +     I  L+   K++GA   C    +  +G  + P +  NV  +MRI
Sbjct:  152 FTYTRREPIGVCGQIIPWNGPLILFIWKIGAALSCGNTVIVKPAEQTPLTALYMASLIKEAGFPPGVVNVVPGYGSTAGAAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLDSGISQGPQIDKEQHAKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRI 396          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25
Identity = 71/216 (32.87%), Postives = 114/216 (52.78%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642
            K       P+GV   I P+NYP+N+A  KIAPAL AGN +++K      ++ L+       AGFPKG+++ ++G G+  G ++  HP ++ I+FTG    G+ + + A   +  + +E GGK   +V EDADLD        G    SGQ CT+   + V +SV D  +            VG P +++  + PVV+++  N I+  +   K++GA
Sbjct:  146 KLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLVEEAGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIVQQLAASNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGA 361          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_STAES (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rocA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25
Identity = 63/211 (29.86%), Postives = 111/211 (52.61%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIP--------LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            P+G  + IPP+N+P  +        ++AGN+++LKP     + A  ++     AG P+G+++ V G   EIGD+L  H   + ++FTG   TG  I +++ ++         +  E+GGKDA +V  + D DL A  I+   F +SGQ+C+A    +V + V D +          LT+G  EE+  + PV+++   + I+  +   K++G
Sbjct:  171 PIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLMEILEEAGLPQGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQQFLKRVIAEMGGKDAIVVDNNVDTDLAAEAIVTSAFGFSGQKCSACSRAIVHQDVHDEILEKAIQLTQKLTLGNTEENTFMGPVINQKQFDKIKNYIEIGKKEG 381          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_STAEQ (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rocA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25
Identity = 63/211 (29.86%), Postives = 111/211 (52.61%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIP--------LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            P+G  + IPP+N+P  +        ++AGN+++LKP     + A  ++     AG P+G+++ V G   EIGD+L  H   + ++FTG   TG  I +++ ++         +  E+GGKDA +V  + D DL A  I+   F +SGQ+C+A    +V + V D +          LT+G  EE+  + PV+++   + I+  +   K++G
Sbjct:  171 PIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLMEILEEAGLPQGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQQFLKRVIAEMGGKDAIVVDNNVDTDLAAEAIVTSAFGFSGQKCSACSRAIVHQDVHDEILEKAIQLTQKLTLGNTEENTFMGPVINQKQFDKIKNYIEIGKKEG 381          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECOLC (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=betB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPNGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECO7I (Betaine aldehyde dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25
Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRHEPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDA_STAHJ (Putative aldehyde dehydrogenase aldA OS=Staphylococcus haemolyticus (strain JCSC1435) GN=aldA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25
Identity = 72/209 (34.45%), Postives = 112/209 (53.59%), Query Frame = 1
Query:   19 LTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQ 633
            L  N P+GVV A+  +N+P+ LA  K+APAL AGN++V++P +   ++ + +   F     PKG+++ +TGKGSE GD +  H  VN +SFTG  D G  ++K     ++P  +ELGGK A I+ +DA+LD V      G     G+ C+A   +LV  S+ D +          + VG P +E   ++          IE  V  A++
Sbjct:  144 LVVNEPVGVVGAVVAWNFPILLASWKLAPALAAGNTIVIQPSSSTPLSLIELAKIFQEV-LPKGVVNVLTGKGSESGDAIFNHEGVNKLSFTGSTDVGYGVAKAGAERIVPTTLELGGKSANIIFDDANLDQVVEGAQLGILFNQGEVCSAGSRLLVQSSIYDKVMPKLKEAFENIKVGDPFDEDVKMSAQTGPEQLEKIESYVKIAEE 351          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDA_STAAR (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MRSA252) GN=aldA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25
Identity = 71/207 (34.30%), Postives = 115/207 (55.56%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA 642
            P+GVV A+  +N+P+ LA  KIAPA+ AGN++V++P +   ++ L +   F     P G+++ +TGKGSE G+ +  H  V+ +SFTG  D G  +++ A   ++P  +ELGGK A I+L+DA+LDL    I  G     G+ C+A   +LV E + D L          + VG P +E+  +     +   + I+  +  AK+  A
Sbjct:  148 PIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPNGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGDPQDEATQMGSQTGKDQLDKIQSYIDAAKESDA 353          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH3_YEAST9.796e-2632.11Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyce... [more]
ALDH2_YEAST9.796e-2633.03Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyce... [more]
AL1A7_RAT9.796e-2633.06Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norv... [more]
YLX7_SCHPO1.279e-2532.87Putative aldehyde dehydrogenase-like protein C922.... [more]
ROCA_STAES1.279e-2529.861-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAEQ1.279e-2529.861-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
BETB_ECOLC1.279e-2540.65Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO7I1.279e-2540.65Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
ALDA_STAHJ1.279e-2534.45Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAR1.279e-2534.30Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
back to top