CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLU (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25
Identity = 79/206 (38.35%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIPL-QMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I L  MELGGK   IV +DAD++ V   +   G+  +GQ CTA   +   + + D+L          L  G P +ES ++ P+ S +  + +   V +AK  G
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIKLTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLDRVSKAVEEAKATG 342          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_SHIF8 (Betaine aldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=betB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGGGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECOSM (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=betB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECOHS (Betaine aldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECODH (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=betB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECO5E (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=betB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECO57 (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=betB PE=3 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECO55 (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=betB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECO24 (Betaine aldehyde dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=betB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            T +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK   IV +DADLDL A   +   F  SGQ CT
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCT 287          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ABDH_ECOLU1.279e-2538.35Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
BETB_SHIF81.671e-2540.65Betaine aldehyde dehydrogenase OS=Shigella flexner... [more]
BETB_ECOSM1.671e-2540.65Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLI1.671e-2540.65Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOHS1.671e-2540.65Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECODH1.671e-2540.65Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO5E1.671e-2540.65Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO571.671e-2540.65Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO551.671e-2540.65Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO241.671e-2540.65Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
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