CX296726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_SHIFL (Gamma-aminobutyraldehyde dehydrogenase OS=Shigella flexneri GN=ydcW PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639 PLGVV +I P+NYP+ +A K+APAL AGN +VLKP + AL + FP G+I+ + G+G +GD LT HP V +S TG TG IS A I MELGGK IV +DAD++ V + G+ +GQ CTA + + + D+L L G P +ES ++ P+ S + + V +AK G Sbjct: 138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATG 342
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_SHIF8 (Gamma-aminobutyraldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=ydcW PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639 PLGVV +I P+NYP+ +A K+APAL AGN +VLKP + AL + FP G+I+ + G+G +GD LT HP V +S TG TG IS A I MELGGK IV +DAD++ V + G+ +GQ CTA + + + D+L L G P +ES ++ P+ S + + V +AK G Sbjct: 138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATG 342
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_SALTY (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella typhimurium GN=ydcW PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 75/203 (36.95%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPE-ESCDITPVVSESSANFIEGLVMDAK 630 P+GVV +I P+NYP+ +A K+APAL AGN +V+KP + AL + FP G+++ + G+G +GD LT H V +S TG TG I + + MELGGK IV +DADLD VA + GF +GQ CTA + + D+L L +G PE ES ++ P+ S + + V +AK Sbjct: 138 PIGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIKPSEITPLTALKLA-VLAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAIKRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDESTELGPLSSLAHLKRVTAAVEEAK 339
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECOSE (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=ydcW PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639 PLGVV +I P+NYP+ +A K+APAL AGN +VLKP + AL + FP G+I+ + G+G +GD LT HP V +S TG TG IS A I MELGGK IV +DAD++ V + G+ +GQ CTA + + + D+L L G P +ES ++ P+ S + + V +AK G Sbjct: 138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATG 342
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLC (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ydcW PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639 PLGVV +I P+NYP+ +A K+APAL AGN +VLKP + AL + FP G+I+ + G+G +GD LT HP V +S TG TG IS A I MELGGK IV +DAD++ V + G+ +GQ CTA + + + D+L L G P +ES ++ P+ S + + V +AK G Sbjct: 138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATG 342
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECOHS (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=ydcW PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639 PLGVV +I P+NYP+ +A K+APAL AGN +VLKP + AL + FP G+I+ + G+G +GD LT HP V +S TG TG IS A I MELGGK IV +DAD++ V + G+ +GQ CTA + + + D+L L G P +ES ++ P+ S + + V +AK G Sbjct: 138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATG 342
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECO8A (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=ydcW PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639 PLGVV +I P+NYP+ +A K+APAL AGN +VLKP + AL + FP G+I+ + G+G +GD LT HP V +S TG TG IS A I MELGGK IV +DAD++ V + G+ +GQ CTA + + + D+L L G P +ES ++ P+ S + + V +AK G Sbjct: 138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATG 342
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECO55 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=ydcW PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639 PLGVV +I P+NYP+ +A K+APAL AGN +VLKP + AL + FP G+I+ + G+G +GD LT HP V +S TG TG IS A I MELGGK IV +DAD++ V + G+ +GQ CTA + + + D+L L G P +ES ++ P+ S + + V +AK G Sbjct: 138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATG 342
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECO24 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ydcW PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639 PLGVV +I P+NYP+ +A K+APAL AGN +VLKP + AL + FP G+I+ + G+G +GD LT HP V +S TG TG IS A I MELGGK IV +DAD++ V + G+ +GQ CTA + + + D+L L G P +ES ++ P+ S + + V +AK G Sbjct: 138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATG 342
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ECOL5 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=betB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.862e-25 Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459 T + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP + AL + + AG P G+ + + G G+E G +LT HP + +SFTGG ++ S + + + MELGGK IV +DADL+L A + F SGQ CT Sbjct: 133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLELAADIAMMANFFSSGQVCT 287 The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bpback to top |