CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECOK1 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=ydcW PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I    MELGGK   IV +DAD++ V   +   G+  +GQ CTA   +   + + D+L          L  G P +ES ++ P+ S +    +   V +AK  G
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGSPDDESTELGPLSSLAHLERVSKAVEEAKATG 342          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECODH (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=ydcW PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I    MELGGK   IV +DAD++ V   +   G+  +GQ CTA   +   + + D+L          L  G P +ES ++ P+ S +    +   V +AK  G
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATG 342          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECOBW (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=ydcW PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I    MELGGK   IV +DAD++ V   +   G+  +GQ CTA   +   + + D+L          L  G P +ES ++ P+ S +    +   V +AK  G
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATG 342          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECO81 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=ydcW PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I    MELGGK   IV +DAD++ V   +   G+  +GQ CTA   +   + + D+L          L  G P +ES ++ P+ S +    +   V +AK  G
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGSPDDESTELGPLSSLAHLERVSKAVEEAKATG 342          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECO45 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I    MELGGK   IV +DAD++ V   +   G+  +GQ CTA   +   + + D+L          L  G P +ES ++ P+ S +    +   V +AK  G
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGSPDDESTELGPLSSLAHLERVSKAVEEAKATG 342          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECO27 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I    MELGGK   IV +DAD++ V   +   G+  +GQ CTA   +   + + D+L          L  G P +ES ++ P+ S +    +   V +AK  G
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGSPDDESTELGPLSSLAHLERVSKAVEEAKATG 342          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: XYLC_PSEPU (Benzaldehyde dehydrogenase [NAD+] OS=Pseudomonas putida GN=xylC PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.293e-25
Identity = 76/240 (31.67%), Postives = 121/240 (50.42%), Query Frame = 1
Query:   19 LTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMV-HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI--PLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRI 723
            L   +P+GVV  I P+N+P+ LA+  +APAL  GN+++LKP  Q AV    ++   F  AG P G++  + G G+++G+ +  +  +N ISFTG    G  I +K G +   + +ELGG +  IVL DADL+   +    G F + GQ C A    LV   VA             L VG P  +   + P+++E     +  LV  A++ GA        +       ++ +V+P+M +
Sbjct:  140 LCQRVPVGVVGVIAPWNFPLFLAMRSVAPALALGNAVILKPDLQTAVTGGALIAEIFSDAGMPDGVLHVLPG-GADVGESMVANSGINMISFTGSTQVGRLIGEKCGRMLKKVALELGGNNVHIVLPDADLEGAVSCAAWGTFLHQGQVCMAAGRHLVHRDVAQQYAEKLALRAKNLVVGDPNSDQVHLGPLINEKQVVRVHALVESAQRAGAQVLAGGTYQDRYYQATVIMDVKPEMEV 378          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_KLEP3 (Betaine aldehyde dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betB PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.293e-25
Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCT 459
            + +  T   PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  ISFTGG       ++ S  + +  + MELGGK   I+ +DADLDL A   +   F  SGQ CT
Sbjct:  133 SSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGIGAETGQYLTEHPGIAKISFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIIADDADLDLAADIAMMANFYSSGQVCT 287          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_SALCH (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella choleraesuis GN=ydcW PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.293e-25
Identity = 74/203 (36.45%), Postives = 106/203 (52.22%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPE-ESCDITPVVSESSANFIEGLVMDAK 630
            P+GVV +I P+NYP+ +A  K+APAL AGN +V+KP     + AL +        FP G+++ + G+G  +GD LT H  V  +S TG   TG  I +     +    MELGGK   IV +DADLD  A  +   GF  +GQ CTA   +     + D+L          L +G PE ES ++ P+ S +    +   V +AK
Sbjct:  138 PIGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIKPSEITPLTALKLA-ALAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAIKRTHMELGGKAPVIVFDDADLDAAAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPEDESTELGPLSSLAHLKRVTAAVEEAK 339          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BADH_HORVU (Betaine aldehyde dehydrogenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.083e-24
Identity = 76/240 (31.67%), Postives = 120/240 (50.00%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMI--PLQMELGGKDACIVLED-ADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQ-----EYRREGNLIWPLLLDNVRPDMRI 723
            P+GVV  I P+NYP+ +A  K+APAL AG + VLKP    ++  L +       G P G+++ +TG G + G  +  HP V+ I+FTG   TG +I   A  +  P+ +ELGGK   +  +D AD+D      + G F   GQ C+A   +L+ E +A+            + +  P EE C +  V+S+     I+  +  A+ +GAT        ++  +G  I P +   V   M+I
Sbjct:  152 PIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASLTCLELGAICEEIGLPSGVLNIITGLGPDAGAPIASHPHVDKIAFTGSTATGKTIMTAAAQMVKPVSLELGGKSPLVTFDDVADIDKAVEWPMLGCFFNGGQVCSATSRLLLHEKIAEPFLDRLVEWAKNIKISDPLEEGCRLGSVISKGQYEQIKKFISTARSEGATILHGGDRPKHLGKGFFIEPTINTGVSTSMQI 391          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ABDH_ECOK16.350e-2537.86Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECODH6.350e-2537.86Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOBW6.350e-2537.86Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO816.350e-2537.86Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO456.350e-2537.86Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO276.350e-2537.86Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
XYLC_PSEPU8.293e-2531.67Benzaldehyde dehydrogenase [NAD+] OS=Pseudomonas p... [more]
BETB_KLEP38.293e-2540.00Betaine aldehyde dehydrogenase OS=Klebsiella pneum... [more]
ABDH_SALCH8.293e-2536.45Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
BADH_HORVU1.083e-2431.67Betaine aldehyde dehydrogenase OS=Hordeum vulgare ... [more]

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Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
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