CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALD1_STAS1 (Putative aldehyde dehydrogenase SSP0762 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0762 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.083e-24
Identity = 77/239 (32.22%), Postives = 116/239 (48.54%), Query Frame = 1
Query:   37 LGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRI 723
            +GV   I P+N+P N    K+A A  AG+ +V KP  +   AA+ +   F   G PKG+ + V G G  +G+ L+ HP V  +SFTG G TG SI KKA      + +ELGGK   I+L+DAD+D  A+         +GQ CTA    +V  S+ +            + VG P EE   + P++S+   + ++  +    ++GA          E   +G    P + +NV   M I
Sbjct:  137 IGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVFKPSEETPFAAIILAEIFDKVGVPKGVFNLVNGDGQGVGNPLSEHPKVRMMSFTGSGPTGSSIMKKAAEDFKKVSLELGGKSPYIILDDADIDGAASAAANKVVFNTGQVCTAGTRTIVPASIKEDFLTAVKEKFSQVKVGNPREEGTQVGPIISKKQFDQVQAYIDKGIEEGAELLYGGPGKPEGLDKGYFARPTIFNNVDNSMTI 375          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECOSM (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.415e-24
Identity = 77/206 (37.38%), Postives = 109/206 (52.91%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I    MELGGK   IV +DAD++ V   +   G+  +GQ CTA   +   + + D+L          L  G P ++S ++ P+ S +    +   V +AK  G
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDDSTELGPLSSLAHLERVSKAVEEAKATG 342          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: NAHF_PSEU8 (Salicylaldehyde dehydrogenase OS=Pseudomonas sp. (strain C18) GN=doxF PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.848e-24
Identity = 80/243 (32.92%), Postives = 117/243 (48.15%), Query Frame = 1
Query:   19 LTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTG---KGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP--EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRI 723
            +T   P+G +L+I P+N    LA   IA  L+ GN++V K           +  C   AG P G+++ +     +  EI D L     +  I+FTG    G  I++KA   +    +ELGGK   IVL+DAD+D      + G F + GQ C + + ++V E +AD            L+ G P     C I P+VS +S   I GL  DA  KGA        +G L+   +LD+V+ DMRI
Sbjct:  133 MTLRQPVGPILSIVPWNGTAVLAARAIAYPLVCGNTVVFKGSEFSPATHALITQCVQEAGLPAGVLNYLNSSPDRSPEIADALISAKEIRRINFTGSTRVGSIIAQKAAQHLKRCLLELGGKSPLIVLDDADIDAAVKAAVFGSFLFQGQICMSTERLIVDEKIADEFVAKFVEKTKRLSAGDPCVTGDCIIGPMVSPNSGERINGLFKDAIDKGAKVVCGGLAQGALMPATILDHVKSDMRI 375          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: NAHF_PSEPU (Salicylaldehyde dehydrogenase OS=Pseudomonas putida GN=nahF PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.848e-24
Identity = 80/243 (32.92%), Postives = 117/243 (48.15%), Query Frame = 1
Query:   19 LTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTG---KGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP--EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRI 723
            +T   P+G +L+I P+N    LA   IA  L+ GN++V K           +  C   AG P G+++ +     +  EI D L     +  I+FTG    G  I++KA   +    +ELGGK   IVL+DAD+D      + G F + GQ C + + ++V E +AD            L+ G P     C I P+VS +S   I GL  DA  KGA        +G L+   +LD+V+ DMRI
Sbjct:  133 MTLRQPVGPILSIVPWNGTAVLAARAIAYPLVCGNTVVFKGSEFSPATHALITQCVQEAGLPAGVLNYLNSSPDRSPEIADALISAKEIRRINFTGSTRVGSIIAQKAAQHLKRCLLELGGKSPLIVLDDADIDAAVKAAVFGSFLFQGQICMSTERLIVDEKIADEFVAKFVEKTKRLSAGDPCVTGDCIIGPMVSPNSGERINGLFKDAIDKGAKVVCGGLAQGALMPATILDHVKSDMRI 375          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDY_BACSU (Uncharacterized aldehyde dehydrogenase aldY OS=Bacillus subtilis GN=aldY PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.848e-24
Identity = 73/224 (32.59%), Postives = 112/224 (50.00%), Query Frame = 1
Query:   31 IPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMV-HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMI--PLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESCDIT-PVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWP 687
            +PLGV+ +I PFN+P+NL++  IAPA+  GNS+V KP  Q A++   ++   F  AG P G+++ +     EIGD +  +P    ISFTG    G  I + AG     + +ELGG +   VL DAD+D      I G F + GQ C  +  ++V + V D            L  G   +   +  P+++E        ++  AK  G     E +R GN++ P
Sbjct:  142 LPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTP 365          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL9A1_HUMAN (4-trimethylaminobutyraldehyde dehydrogenase OS=Homo sapiens GN=ALDH9A1 PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 1.848e-24
Identity = 79/245 (32.24%), Postives = 115/245 (46.94%), Query Frame = 1
Query:   22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA-TFC--------QEYRREGNLIWPLLLDNVRPDM 717
            T   PLGV + I  +NYP  +A  K APAL  GN++V KP     V+AL +   +  AG P GL + V G G+  G FL  HP V  +SFTG   TG+ I + +  G+ P+ +ELGGK   I+  D D++      +   F   GQ C     V V + + D            + +G P  E   + P+++      + G V  AK++GA   C            ++G  + P +L N R DM
Sbjct:  142 TRREPLGVCVGIGAWNYPFQIASWKSAPALACGNAMVFKPSPFTPVSALLLAEIYSEAGVPPGLFNVVQG-GAATGQFLCQHPDVAKVSFTGSVPTGMKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMNNAVKGALMANFLTQGQVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDIYVPEDPKLKDGYYMRPCVLTNCRDDM 385          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1B1_RAT (Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.848e-24
Identity = 80/245 (32.65%), Postives = 118/245 (48.16%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRI 723
            +C T + P+GV   I P+N+P+ +   K+APAL  GN++V+K   Q  ++AL++      AGFP G+++ +TG G   G  +  H  V+ ++FTG  + G  I K AG   L+   +ELGGK   IVL DAD+D       +  F   GQ C A     V ES+                VG P E      P V +     I G +   +++GA      + +   G  I P +  NV+ DMRI
Sbjct:  170 FCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALFFNMGQCCCAGSRTFVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILGYIRLGQKEGAKLLCGGERFGERGFFIKPTVFGNVQDDMRI 414          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECO5E (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.848e-24
Identity = 77/206 (37.38%), Postives = 108/206 (52.43%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I    MELGGK   IV +DAD++ V   +   G+  +GQ CT    +   + + D+L          L  G P +ES ++ P+ S +    +   V +AK  G
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTVACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATG 342          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_ECO57 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=ydcW PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.848e-24
Identity = 77/206 (37.38%), Postives = 108/206 (52.43%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKG 639
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I    MELGGK   IV +DAD++ V   +   G+  +GQ CT    +   + + D+L          L  G P +ES ++ P+ S +    +   V +AK  G
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTVACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATG 342          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_AGRRK (Betaine aldehyde dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=betB PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.413e-24
Identity = 78/247 (31.58%), Postives = 114/247 (46.15%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC------QEYRREGNLIWPLLLDNVRPDMRI 723
            +  T  +PLGV + I  +NYP  +A  K APAL+AGN++V KP     + AL +      AG PKGL + + G   E G  L  HP V  +S TG   TG  ++  A   +  + MELGGK   IV +DAD+D      + G F  +GQ C+    V V   +              + +G P +E+  + P+VS +    +   +   K +GAT             EG  + P +  +V  DM I
Sbjct:  135 FAYTKRVPLGVCVGIGAWNYPQQIACWKGAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLYNVIQG-DRETGPLLINHPDVAKVSLTGSVPTGRKVAAAAAGSLKHVTMELGGKSPLIVFDDADIDSAIGGAMLGNFYSTGQVCSNGTRVFVNRKIKAEFLKRLKARTEAMLIGDPMDEATQVGPMVSWAQREKVLSYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDDMTI 380          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALD1_STAS11.083e-2432.22Putative aldehyde dehydrogenase SSP0762 OS=Staphyl... [more]
ABDH_ECOSM1.415e-2437.38Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
NAHF_PSEU81.848e-2432.92Salicylaldehyde dehydrogenase OS=Pseudomonas sp. (... [more]
NAHF_PSEPU1.848e-2432.92Salicylaldehyde dehydrogenase OS=Pseudomonas putid... [more]
ALDY_BACSU1.848e-2432.59Uncharacterized aldehyde dehydrogenase aldY OS=Bac... [more]
AL9A1_HUMAN1.848e-2432.244-trimethylaminobutyraldehyde dehydrogenase OS=Hom... [more]
AL1B1_RAT1.848e-2432.65Aldehyde dehydrogenase X, mitochondrial OS=Rattus ... [more]
ABDH_ECO5E1.848e-2437.38Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO571.848e-2437.38Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
BETB_AGRRK2.413e-2431.58Betaine aldehyde dehydrogenase OS=Agrobacterium ra... [more]

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Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
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