CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20
Identity = 75/245 (30.61%), Postives = 111/245 (45.31%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRI 723
            +  T + P+GV   I P+N+P+ +   K+ PAL  GN +V+K   Q  + AL++ +    AGFP G+++ V G G   G  +  H  V+ ++FTG  + G  I   AG   L+   +ELGGK   I++ DAD+D          F   GQ C A     V E V D              VG P +S  +  P V E+    I G +   +Q+GA            G  I P +  +V+  M I
Sbjct:  170 FSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTI 414          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH2_MESAU (Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20
Identity = 75/245 (30.61%), Postives = 111/245 (45.31%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRI 723
            +  T + P+GV   I P+N+P+ +   K+ PAL  GN +V+K   Q  + AL++ +    AGFP G+++ V G G   G  +  H  V+ ++FTG  + G  I   AG   L+   +ELGGK   I++ DAD+D          F   GQ C A     V E V D              VG P +S  +  P V E+    I G +   +Q+GA            G  I P +  +V+  M I
Sbjct:  151 FSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTI 395          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1L2_MOUSE (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Mus musculus GN=Aldh1l2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20
Identity = 72/240 (30.00%), Postives = 104/240 (43.33%), Query Frame = 1
Query:   22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDM 717
            T   PLG    I P+NYP+ +   K A  L AGN+LVLKP     + AL        AGFPKG+I+ + G G   G  L+ HP +  + FTG    G  I K   +  L+   +ELGGK   I+  D DL+      +   F   G+ C A   + V E++ D            + +G P + S D  P    +    +        Q+GAT     ++ +R G  + P +   V   M
Sbjct:  580 TKKEPLGACAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELTVKAGFPKGVINIIPGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMKSCAVSNLKKVSLELGGKSPLIIFSDCDLEKAVRMGMGAVFFNKGENCIAAGRLFVEEAIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHRAHLEKLLQYCETGVQEGATLVYGGRQVQRPGFFMEPTVFTGVEDHM 819          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: IOLA_LISMO (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria monocytogenes GN=iolA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.114e-20
Identity = 70/238 (29.41%), Postives = 110/238 (46.22%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISK--KAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR----EGNLIWPLLLDNVRPDMRI 723
            P+GVV  I PFN+P+ +       A+  GNS +LKP  +  +    +V  F  AG PKG+ + V G    +   L  +  +  +SF G    G  + K   A +  +Q   G K+  IVL DADL+    N+I   F  +G+RC A  VV V E +AD            + +G   ++   + PV+ E +       +    ++GA    + R     EG+ + P +L++V  DM I
Sbjct:  142 PVGVVGGIAPFNFPMMVPCWMFPMAIALGNSFILKPSERTPLLMEKLVELFSEAGLPKGVFNVVYGAHDVVNGILE-NEIIKAVSFVGSKPVGEYVYKTGSANLKRVQALTGAKNHTIVLNDADLEDTVTNVISAAFGSAGERCMACAVVTVEEGIADEFLEALRTAAQNVKIGNGLDDGVFLGPVIREENQKRTIAYIEKGIEEGAKLTVDGRETGLSEGHFVGPTILEDVTTDMTI 378          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.114e-20
Identity = 69/215 (32.09%), Postives = 102/215 (47.44%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGA 642
            +  T + P+GV   I P+N+P+ +   K+ PAL  GN +V+K   Q  + AL++ +    AGFP G+++ V G G   G  +  H  V+ ++FTG  + G  I   AG   L+   +ELGGK   I++ DAD+D          F   GQ C A     V E + D              VG P +S  +  P V E+    I G +   KQ+GA
Sbjct:  168 FSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGA 382          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.114e-20
Identity = 69/215 (32.09%), Postives = 102/215 (47.44%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGA 642
            +  T + P+GV   I P+N+P+ +   K+ PAL  GN +V+K   Q  + AL++ +    AGFP G+++ V G G   G  +  H  V+ ++FTG  + G  I   AG   L+   +ELGGK   I++ DAD+D          F   GQ C A     V E + D              VG P +S  +  P V E+    I G +   KQ+GA
Sbjct:  168 FSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGA 382          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: IOLA_LISIN (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria innocua GN=iolA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20
Identity = 70/238 (29.41%), Postives = 109/238 (45.80%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISK--KAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR----EGNLIWPLLLDNVRPDMRI 723
            P+GVV  I PFN+P+ +       A+  GNS +LKP  +  +    +V  F  AG PKG+ + V G    +   L  +  +  +SF G    G  + K   A +  +Q   G K+  IVL DADL+    N+I   F  +G+RC A  VV V E +AD            + +G   ++   + PV+ E +       +    ++GA    + R     EG  + P +L++V  DM I
Sbjct:  142 PVGVVGGIAPFNFPMMVPCWMFPMAIALGNSFILKPSERTPLLMEKLVELFSEAGLPKGVFNVVYGAHDVVNGILE-NETIKAVSFVGSKPVGEYVYKTGSANLKRVQALTGAKNHTIVLNDADLEDTVTNVISAAFGSAGERCMACAVVTVEEGIADDFLAALRTAAQNVKIGNGLDDGVFLGPVIREENQKRTIAYIEKGVEEGAKLTVDGRETGLSEGYFVGPTILEDVTTDMTI 378          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus kaustophilus GN=iolA1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20
Identity = 67/239 (28.03%), Postives = 110/239 (46.03%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD---TGISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR------EGNLIWPLLLDNVRPDMRI 723
            PLGVV  I PFN+P+ + +     A++ GN+ VLKP  +  + A  +   F  AG P G+++ V G   E+ + L  H  +  ISF G       +     A    +Q   G K+  IV+ DAD++    ++I   F  +GQRC A   V+++      +          +     +    +TPV+ +S    + G +    ++GA   ++ R+      EGN + P + D V PDM I
Sbjct:  146 PLGVVAGITPFNFPMMVPLWMFPLAIVCGNTFVLKPSERTPILANKLAELFTEAGAPPGVLNVVHG-AHEVVNALIDHEDIRAISFVGSQPVAKYVYERTAAQGKRVQALSGAKNHHIVMPDADVETAVQHVISSAFGSAGQRCMACSAVVIVGENETFVRRLKQKADELIIGNGMDPEVLLTPVIRQSHREKVLGYIQKGIEEGAVLLRDGRKEMDDRPEGNFLGPTIFDYVTPDMTI 383          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1L2_HUMAN (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20
Identity = 73/240 (30.42%), Postives = 107/240 (44.58%), Query Frame = 1
Query:   22 TSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDM 717
            T   PLGV   I P+NYP+ +   K A  L AGN+LVLKP     + AL        AGFPKG+I+ + G G   G  L+ HP +  + FTG    G  I K   +  L+   +ELGGK   I+  D +LD      +   F   G+ C A   + V ES+ D            + +G P + S D  P   ++    +        ++GAT     ++ +R G  + P +  +V   M
Sbjct:  580 TKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELSVKAGFPKGVINIIPGSGGIAGQRLSEHPDIRKLGFTGSTPIGKQIMKSCAVSNLKKVSLELGGKSPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGGRQVQRPGFFMEPTVFTDVEDYM 819          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: SSDH_PONPY (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pongo pygmaeus GN=ALDH5A1 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20
Identity = 76/239 (31.80%), Postives = 108/239 (45.19%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKG---LISCVTGKGSEIGDFLTMHPAVNCISFTGGDT--GISISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIWPLLLDNVRPDM 717
            P+GV   I P+N+P  +   K+  AL AG ++V+KP      +AL +      AG P G   +I C      E+G+ +   P V+ ISFTG  T   I +   A  +  + MELGG    IV + A++D   A  +   F  +GQ C      LV   + D+ +          L VG   EE     P+++E +   +E  V DA  KGAT     +R     N   P LL NV  DM
Sbjct:  194 PIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRHQLGKNFFEPTLLCNVTQDM 432          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH2_RAT1.619e-2030.61Aldehyde dehydrogenase, mitochondrial OS=Rattus no... [more]
ALDH2_MESAU1.619e-2030.61Aldehyde dehydrogenase, mitochondrial OS=Mesocrice... [more]
AL1L2_MOUSE1.619e-2030.00Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
IOLA_LISMO2.114e-2029.41Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ALDH2_PONAB2.114e-2032.09Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]
ALDH2_HUMAN2.114e-2032.09Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
IOLA_LISIN2.761e-2029.41Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_GEOKA2.761e-2028.03Methylmalonate semialdehyde dehydrogenase [acylati... [more]
AL1L2_HUMAN2.761e-2030.42Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
SSDH_PONPY3.606e-2031.80Succinate-semialdehyde dehydrogenase, mitochondria... [more]

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Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
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