CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: CROM_ENTDO (Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20
Identity = 69/246 (28.05%), Postives = 112/246 (45.53%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGN----LIWPLLLDNVRPDMRI 723
            +  T + P+G+   I P+NYP+ +   K+APAL  GN +V+KP  Q  + AL+       AGFP G+++ V G G+  G  ++ H  +N +SFTG  + G  + + AG   L+   +EL GK   +V  D DLD       +  F   GQ   +     V ES+ +              +G P E   +  P + E     +   +  A+++GA       + G+     I P +   V  +M+I
Sbjct:  146 FSFTKHEPVGICGLIIPWNYPMLMMTWKMAPALSCGNCIVVKPAEQTPLTALYCASLMEEAGFPPGVVNVVPGYGTICGQSISSHLDINKVSFTGSTEVGKLVMQAAGSSNLKRCSLELSGKCPVVVFPDTDLDFAVQQAHEAAFQNMGQCRWSGSRAYVHESIYEEFVKRSVEQATRRKIGDPYELDTEHGPQIDEEQYTKVLDYIKSAQEQGAKLKYGGNKHGDKGGYYIEPTVFSEVSDNMKI 391          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20
Identity = 68/215 (31.63%), Postives = 103/215 (47.91%), Query Frame = 1
Query:   13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGA 642
            +  T + P+GV   I P+N+P+ +  +K+ PAL  GN +V+K   Q  + AL++ +    AGFP G+++ V G G   G  +  H  V+ ++FTG  + G  I   AG   L+   +ELGGK   I++ DAD+D          F   GQ C A     V E V                VG P +S  +  P V E+  N + G +   K++GA
Sbjct:  151 FSYTRHEPVGVCGQIIPWNFPLLMQAAKLGPALATGNVVVMKVAEQTPLTALYVANLTKEAGFPPGVVNVVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGRSNLKKVTLELGGKSPNIIVSDADMDWAVEQAHFALFFNQGQCCGAGSRTFVQEDVYAEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFNKVLGYIKSGKEEGA 365          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: SSDH_PANPA (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20
Identity = 76/239 (31.80%), Postives = 108/239 (45.19%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKG---LISCVTGKGSEIGDFLTMHPAVNCISFTGGDT--GISISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIWPLLLDNVRPDM 717
            P+GV   I P+N+P  +   K+  AL AG ++V+KP      +AL +      AG P G   +I C      E+G+ +   P V+ ISFTG  T   I +   A  +  + MELGG    IV + A++D   A  +   F  +GQ C      LV   + D+ +          L VG   EE     P+++E +   +E  V DA  KGAT     +R     N   P LL NV  DM
Sbjct:  194 PIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDM 432          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: SSDH_HYLLA (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Hylobates lar GN=ALDH5A1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20
Identity = 76/239 (31.80%), Postives = 108/239 (45.19%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKG---LISCVTGKGSEIGDFLTMHPAVNCISFTGGDT--GISISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIWPLLLDNVRPDM 717
            P+GV   I P+N+P  +   K+  AL AG ++V+KP      +AL +      AG P G   +I C      E+G+ +   P V+ ISFTG  T   I +   A  +  + MELGG    IV + A++D   A  +   F  +GQ C      LV   + D+ +          L VG   EE     P+++E +   +E  V DA  KGAT     +R     N   P LL NV  DM
Sbjct:  194 PIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQRGIHDAFVKAFAEAMKKNLHVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRHQLGKNFFEPTLLCNVTQDM 432          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: SSDH_HUMAN (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20
Identity = 76/239 (31.80%), Postives = 108/239 (45.19%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKG---LISCVTGKGSEIGDFLTMHPAVNCISFTGGDT--GISISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIWPLLLDNVRPDM 717
            P+GV   I P+N+P  +   K+  AL AG ++V+KP      +AL +      AG P G   +I C      E+G+ +   P V+ ISFTG  T   I +   A  +  + MELGG    IV + A++D   A  +   F  +GQ C      LV   + D+ +          L VG   EE     P+++E +   +E  V DA  KGAT     +R     N   P LL NV  DM
Sbjct:  194 PIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDM 432          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: SSDH_GORGO (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla GN=ALDH5A1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20
Identity = 76/239 (31.80%), Postives = 108/239 (45.19%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKG---LISCVTGKGSEIGDFLTMHPAVNCISFTGGDT--GISISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIWPLLLDNVRPDM 717
            P+GV   I P+N+P  +   K+  AL AG ++V+KP      +AL +      AG P G   +I C      E+G+ +   P V+ ISFTG  T   I +   A  +  + MELGG    IV + A++D   A  +   F  +GQ C      LV   + D+ +          L VG   EE     P+++E +   +E  V DA  KGAT     +R     N   P LL NV  DM
Sbjct:  194 PIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDM 432          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: GABD1_MYCUA (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium ulcerans (strain Agy99) GN=gabD1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20
Identity = 70/207 (33.82%), Postives = 99/207 (47.83%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA 642
            PLGVVLA+ P+N+P+  A    APAL+AGN  +LK  +    +AL++      AGFP G    +    S +   L   P V   + TG +  G S+   AG  + P  +ELGG D  IV+  ADLD   +  + G    +GQ C A K  +    + D+           LTVG P +    + P+ +E S + I   V DA   GA
Sbjct:  124 PLGVVLAVMPWNFPLWQAGRFAAPALMAGNVGLLKHASNVPQSALYLADVIARAGFPDGCFQTLLVSASAVEGIL-RDPRVAAATLTGSEPAGQSVGAIAGDEIKPTVLELGGSDPFIVMPSADLDKAVSTAVTGRVQNNGQSCIAAKRFIAHADIYDAFVDKFVEQMSALTVGDPTDPQTQVGPLATEQSRDEIAQQVDDAAAAGA 329          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD1_CAUCR (N-succinylglutamate 5-semialdehyde dehydrogenase 1 OS=Caulobacter crescentus GN=astD1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20
Identity = 61/181 (33.70%), Postives = 95/181 (52.49%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESV-ADSLXXXXXXXXXXLTVGPPEES 561
            P GV+  I PFN+P++LA   I PAL+AGN++V KP  +       M   +  AG P  +++ V G G E G+ L  H A++ + FTGG   G +I +     P   L +ELGG    +V + AD++  A  I++  +  +GQRCT  + +++ E    D+L          L +G P +S
Sbjct:  123 PHGVLAVIGPFNFPMHLANGHIVPALLAGNAVVFKPSEKTPACGQLMGELWRAAGLPDHVLTIVIG-GGEAGEALVRHEALDGVLFTGGVQAGRAIHRALADAPHKILALELGGNAPLVVWDVADIEAAAHLIVQSAYVTAGQRCTCARRLILPEGARGDALLEALTMLMDRLVIGGPFQS 302          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH9_POLMI (Aldehyde dehydrogenase 9 (Fragment) OS=Polyandrocarpa misakiensis GN=ALDH9 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20
Identity = 68/226 (30.09%), Postives = 104/226 (46.02%), Query Frame = 1
Query:   70 YPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISI----SKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRI 723
            +P+ +   K+ PAL  GN++V+K   Q  + AL++      AGFP G+I+ ++G G   G  ++ H  V+ ++FTG      I    + K+ +  + +ELGGK   IVL D+DLD        G F   GQ C A   + V E V D             TVG P  E  +  P +     N I  ++ + KQ GA      + +  +G  I P +  +V  D  I
Sbjct:    1 FPLLMQAWKLGPALACGNTVVMKTAEQTPLTALYVAALAKEAGFPPGVINIISGYGPTAGAAISEHMDVDKVAFTGSTETAHIVMEAAAKSNLKRVSLELGGKSPMIVLADSDLDFAVDTCHHGLFFNMGQCCCAGSRIYVQEGVYDEFVKKSVERAKKRTVGDPFTEGIEQGPQIDTEQFNKINRMIEEGKQSGAKLLCGGKRWGDKGYYIEPTVFSDVPDDSTI 226          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: SSDH_PANTR (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan troglodytes GN=ALDH5A1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.049e-19
Identity = 76/239 (31.80%), Postives = 107/239 (44.77%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKG---LISCVTGKGSEIGDFLTMHPAVNCISFTGGDT--GISISKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADS-LXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRRE---GNLIWPLLLDNVRPDM 717
            P GV   I P+N+P  +   K+  AL AG ++V+KP      +AL +      AG P G   +I C      E+G+ +   P V+ ISFTG  T   I +   A  +  + MELGG    IV + A++D   A  +   F  +GQ C      LV   + D+ +          L VG   EE     P+++E +   +E  V DA  KGAT     +R     N   P LL NV  DM
Sbjct:  194 PXGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDM 432          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CROM_ENTDO3.606e-2028.05Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=... [more]
ALDH2_HORSE3.606e-2031.63Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
SSDH_PANPA4.709e-2031.80Succinate-semialdehyde dehydrogenase, mitochondria... [more]
SSDH_HYLLA4.709e-2031.80Succinate-semialdehyde dehydrogenase, mitochondria... [more]
SSDH_HUMAN4.709e-2031.80Succinate-semialdehyde dehydrogenase, mitochondria... [more]
SSDH_GORGO4.709e-2031.80Succinate-semialdehyde dehydrogenase, mitochondria... [more]
GABD1_MYCUA8.033e-2033.82Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=... [more]
ASTD1_CAUCR8.033e-2033.70N-succinylglutamate 5-semialdehyde dehydrogenase 1... [more]
ALDH9_POLMI8.033e-2030.09Aldehyde dehydrogenase 9 (Fragment) OS=Polyandroca... [more]
SSDH_PANTR1.049e-1931.80Succinate-semialdehyde dehydrogenase, mitochondria... [more]

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Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
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