CX296726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_SHEFN (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=astD PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17 Identity = 54/155 (34.84%), Postives = 83/155 (53.55%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVME 486 P GVV P+N+P +L I PAL+AGN++V KP A M+ C+ AG P+G+++ V G+ E G L HP ++ + FTG TG + ++ +P L +E+GG + IV D +II+ + SGQRCT + + + E Sbjct: 134 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPKVAELMLKCWDKAGLPQGVVNLVQGE-VETGKALASHPQIDGLFFTGSSRTGHILHEQYAGLPGKILALEMGGNNPLIVKGVTDTKAAVHDIIQSAYISSGQRCTCARRLYIEE 287
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_BURVG (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=astD PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17 Identity = 54/153 (35.29%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480 P GVV P+N+P +L I PALIAGN++V KP A V +H AG P G+++ V G+ + G L H ++ + FTG DTG + K+ G P L +E+GG + ++ D+D + I+ F +GQRCT + + V Sbjct: 135 PHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEVWHEAGLPAGVLNLVQGE-KDTGIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGAVEDIDAAVHHTIQSAFLSAGQRCTCARRIFV 286
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_BURA4 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=astD PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17 Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480 P GVV P+N+P +L I PALIAGN++V KP A V + AG P G+++ V G+ + G L H ++ + FTG DTG + K+ G P L +E+GG + ++ E DLD + I+ F +GQRCT + + V Sbjct: 135 PHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEVWQEAGLPAGVLNLVQGE-KDTGIALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVLALEMGGNNPLVIGEVEDLDAAVHHTIQSAFLSAGQRCTCARRIFV 286
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: MMSA_BOVIN (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Bos taurus GN=ALDH6A1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17 Identity = 55/239 (23.01%), Postives = 108/239 (45.19%), Query Frame = 1 Query: 31 IPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGM---IPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYR-------REGNLIWPLLLDNVRPDM 717 +PLGV I PFN+P + + A++ GN+ ++KP + A + + F +G P G ++ + G+ E +F+ HP + ISF G + + G +Q +G K+ +V+ DA+ + ++ F +GQRC A+ +++ L + D+ P+++ + + L+ ++GA+ + R GN + P ++ NV+P+M Sbjct: 176 LPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGATMLLAKLFQDSGAPDGTLNIIHGQ-HEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPELVERAKKLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRSIKVKGYENGNFVGPTIISNVKPNM 413
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_PSEPF (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=astD PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17 Identity = 60/176 (34.09%), Postives = 89/176 (50.57%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESV-ADSLXXXXXXXXXXLTVG 546 P GVV P+N+P +L I PAL+AGNS++ KP A V C+ AG P G+++ + G E G L +P ++ + FTG TG + ++ P L +E+GG + +V + AD+D II+ F +GQRCT + +LV E DSL + VG Sbjct: 135 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNSVLFKPSELTPKVAELTVKCWIEAGLPAGVLNLLQG-ARETGIALAANPGIDGLFFTGSSRTGNHLHQQFAGRPDKILALEMGGNNPLVVDQVADIDAAVYTIIQSAFISAGQRCTCARRLLVPEGAWGDSLLKRLVEVSSTIEVG 309
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_PSEE4 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Pseudomonas entomophila (strain L48) GN=astD PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17 Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESV-ADSLXXXXXXXXXXLTVG 546 P GVV P+N+P +L I PAL+AGN +V KP A V C+ AG P G+++ V G E G L +P ++ + FTG TG + ++ P L +E+GG + +V E DLD II+ F +GQRCT + +LV + DSL ++VG Sbjct: 135 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTVQCWVEAGLPAGVLNLVQG-ARETGVALAANPGIDGLFFTGSSRTGNLLHQQFAGRPDKILALEMGGNNPLVVDEVKDLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDSLIQRLVDVSRSISVG 309
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_BURPS (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei GN=astD PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17 Identity = 54/153 (35.29%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480 P GVV P+N+P +L I PALIAGN++V KP A V + AG P G+++ V G+ + G L H ++ + FTG DTG + ++ G P L +E+GG + +V + D+D + I+ F +GQRCT + +LV Sbjct: 135 PHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLNLVQGE-KDTGVALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVVADVEDIDAAVHHAIQSAFLSAGQRCTCARRILV 286
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_BURP6 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=astD PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17 Identity = 54/153 (35.29%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480 P GVV P+N+P +L I PALIAGN++V KP A V + AG P G+++ V G+ + G L H ++ + FTG DTG + ++ G P L +E+GG + +V + D+D + I+ F +GQRCT + +LV Sbjct: 135 PHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLNLVQGE-KDTGVALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVVADVEDIDAAVHHAIQSAFLSAGQRCTCARRILV 286
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_BURP1 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=astD PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17 Identity = 54/153 (35.29%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480 P GVV P+N+P +L I PALIAGN++V KP A V + AG P G+++ V G+ + G L H ++ + FTG DTG + ++ G P L +E+GG + +V + D+D + I+ F +GQRCT + +LV Sbjct: 135 PHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLNLVQGE-KDTGVALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVVADVEDIDAAVHHAIQSAFLSAGQRCTCARRILV 286
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_BURP0 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=astD PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17 Identity = 54/153 (35.29%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480 P GVV P+N+P +L I PALIAGN++V KP A V + AG P G+++ V G+ + G L H ++ + FTG DTG + ++ G P L +E+GG + +V + D+D + I+ F +GQRCT + +LV Sbjct: 135 PHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLNLVQGE-KDTGVALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVVADVEDIDAAVHHAIQSAFLSAGQRCTCARRILV 286 The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bpback to top |