CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12872 contig Ccv1_Contig12872:500..1223. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH_DEIRA (Aldehyde dehydrogenase OS=Deinococcus radiodurans GN=aldA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.852e-16
Identity = 62/182 (34.07%), Postives = 94/182 (51.65%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKA--GMIPLQMELGGK------DACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP 552
            PLGVV  I P+N+P+ + V K+APAL AGN++VLKP  Q   + + ++        P+G+++ V G G E G  L   P +  I+FTG  +TG  I   A   +IP+ +ELGGK      D  ++ +DA LD     ++    +  G+ CT     L+ ES+ D            +T+G P
Sbjct:  164 PLGVVGQIIPWNFPLLMGVWKLAPALAAGNAVVLKPAEQTPASIMVLMELI-ADLLPEGVVNVVNGFGLEAGKPLASSPRIAKIAFTGETNTGRLIMGYAADNLIPVTLELGGKSPNIFFDDVMMEDDAFLDKAVEGMVMFALN-QGEVCTCPSRALIQESIYDRFMERAVQRVEAITMGHP 343          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_YERPS (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=astD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480
            P GV+    P+N+P +L    I PAL+AGN++V KP       A   V  +  AG P G+++ V G G E G+ L   P ++ + FTG   TG  + ++    P   L +E+GG +A IV +  D D V    I+  F  +GQRCT  + +LV
Sbjct:  148 PHGVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWTAEETVKLWQEAGIPDGVLNLVQG-GRETGEALAAQPDIDGLLFTGSAHTGYHLHRQLAGQPEKMLALEMGGNNALIVEQVKDRDAVVNLAIQSAFISAGQRCTCSRRLLV 299          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_YERPB (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=astD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480
            P GV+    P+N+P +L    I PAL+AGN++V KP       A   V  +  AG P G+++ V G G E G+ L   P ++ + FTG   TG  + ++    P   L +E+GG +A IV +  D D V    I+  F  +GQRCT  + +LV
Sbjct:  148 PHGVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWTAEETVKLWQEAGIPDGVLNLVQG-GRETGEALAAQPDIDGLLFTGSAHTGYHLHRQLAGQPEKMLALEMGGNNALIVEQVKDRDAVVNLAIQSAFISAGQRCTCSRRLLV 299          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_AERS4 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=astD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480
            P GVV    P+N+P +L    I PALIAGN++V KP     + A  M+  +  AG PKG+++ V G+  E G  L  +P ++ + FTG   TG  + ++    P   L +E+GG +  IV + +D+D     I++  F  SGQRCT  + + V
Sbjct:  137 PHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELTPMVAEAMLKIWQEAGLPKGVLNLVQGE-VETGKALAGNPDIDGLFFTGSSRTGHFLHQQFAGQPGKILALEMGGNNPLIVKDVSDVDGAVHAIVQSAFITSGQRCTCSRRLFV 288          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: YNEI_ECOLI (Aldehyde dehydrogenase-like protein yneI OS=Escherichia coli (strain K12) GN=yneI PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 64/235 (27.23%), Postives = 104/235 (44.26%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDM 717
            PLG +LAI P+N+P+   +    P ++AGN  +LK        A  +   F  AG P+G+   +      +   +     +  ++ TG    G +I  +AG  +    +ELGG D  IVL DADL+L     + G +  +GQ C A K  ++ E +A +           L +G P +E   + P+      + +   V     +GA      ++    GN   P +L NV P+M
Sbjct:  126 PLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMIK-DSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLLLGGEKMAGAGNYYPPTVLANVTPEM 359          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: MMSA_AEDAE (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Aedes aegypti GN=AAEL001134 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 58/240 (24.17%), Postives = 107/240 (44.58%), Query Frame = 1
Query:   31 IPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGM--IPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYR-------REGNLIWPLLLDNVRPDMR 720
            +PLGV   I PFN+P  + +     A+  GN+ ++KP  +   A + ++   + AG P G+++ + G    + +F+  +P +  +SF G D  G  I ++AG     +Q  +G K+  +++ DA+ +     +    F  +GQRC A+   + +      +                    D+ PV+S  S   I  LV    ++GA    + R         GN + P +L +V  +M+
Sbjct:  161 LPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPGATMMLMELLNEAGCPPGVVNVIHGAHDAV-NFICDNPTIKAVSFVGSDQAGKYIYERAGRNGKRVQSNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEAKQWIPDLVERARKLKVNAGHVPGTDVGPVISPQSKQRINELVESGVKEGAKLVLDGRSIKVENFENGNFVGPTILTDVSTNMK 399          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_YERPP (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=astD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480
            P GV+    P+N+P +L    I PAL+AGN++V KP       A   V  +  AG P G+++ V G G E G+ L   P ++ + FTG   TG  + ++    P   L +E+GG +A IV +  D D V    I+  F  +GQRCT  + +LV
Sbjct:  148 PHGVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWTAEETVKLWQQAGIPDGVLNLVQG-GRETGEALAAQPDIDGLLFTGSAHTGYHLHRQLAGQPEKMLALEMGGNNALIVEQVKDRDAVVNLAIQSPFISAGQRCTCSRRLLV 299          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_SORC5 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Sorangium cellulosum (strain So ce56) GN=astD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 53/153 (34.64%), Postives = 81/153 (52.94%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480
            P GVV  + P+N+P +L    I PALIAGN +V KP       A      +  AG P G+++ V G G   G  L  HP ++ + FTG   TG ++ ++    P   L +E+GG +  IV + A+ +    +I++  F  +GQRCT  + +LV
Sbjct:  135 PHGVVAVLGPYNFPGHLPNGHIVPALIAGNCVVFKPSELTPRVAEETARLWEKAGIPAGVLNLVQG-GRRTGVALAGHPGIDGLFFTGSSGTGNALHRQLAGQPEKILALEMGGNNPLIVQDVANTEAAIHHILQSSFISAGQRCTCARRLLV 286          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_SHESA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=astD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 58/177 (32.77%), Postives = 89/177 (50.28%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVME-SVADSLXXXXXXXXXXLTVGP 549
            P GVV    P+N+P +L    I PAL+AGN++V KP       A  MV  +  AG P G+I+ V G+  + G  L  HP ++ + FTG   TG  + ++    P   L +E+GG +  I+   AD+     +I++  +  SGQRCT  + + V +    D+L          + VGP
Sbjct:  134 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPKVAELMVSLWEKAGLPAGVINLVQGE-VDTGKALASHPQLDGLFFTGSSRTGHLLHQQYAGHPGKILALEMGGNNPLIIKGVADIKAAVHDILQSAYISSGQRCTCARRLYVEQGEQGDALVAKLVEAVKQIKVGP 309          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH_VIBCH (Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 70/212 (33.02%), Postives = 103/212 (48.58%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIVLED--ADLDLVAANIIKG---GFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642
            P+GVV  I P+N+P+ +A  K+APAL AG ++VLKP  Q  V+ L ++        P G+I+ V G GSE G+ L     ++ ++FTG  + G  I K A   +IP  +ELGGK   I   D  +  D      I+G    F   G+ CT    +LV ES+ +            +  G P +    I   VS+   + I G +   K +GA
Sbjct:  154 PIGVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLKPAEQTPVSILFLMEIIGDL-IPAGVINVVNGFGSEAGNALATSQRIDKLAFTGSTEIGNHILKCAADNLIPSTIELGGKSPNIYFPDIFSHEDQYLDKCIEGALLAFFNQGEVCTCPSRILVHESIYEKFIAKIIERVALIKQGNPLDTETQIGAQVSKEQYDKILGYIQIGKDEGA 364          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH_DEIRA1.852e-1634.07Aldehyde dehydrogenase OS=Deinococcus radiodurans ... [more]
ASTD_YERPS2.419e-1635.95N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_YERPB2.419e-1635.95N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_AERS42.419e-1635.95N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
YNEI_ECOLI3.159e-1627.23Aldehyde dehydrogenase-like protein yneI OS=Escher... [more]
MMSA_AEDAE3.159e-1624.17Probable methylmalonate-semialdehyde dehydrogenase... [more]
ASTD_YERPP3.159e-1635.95N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SORC53.159e-1634.64N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SHESA3.159e-1632.77N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ALDH_VIBCH3.159e-1633.02Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA ... [more]

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Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
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