CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12872 contig Ccv1_Contig12872:500..1223. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH_VIBC3 (Aldehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=aldA PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 70/212 (33.02%), Postives = 103/212 (48.58%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIVLED--ADLDLVAANIIKG---GFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642
            P+GVV  I P+N+P+ +A  K+APAL AG ++VLKP  Q  V+ L ++        P G+I+ V G GSE G+ L     ++ ++FTG  + G  I K A   +IP  +ELGGK   I   D  +  D      I+G    F   G+ CT    +LV ES+ +            +  G P +    I   VS+   + I G +   K +GA
Sbjct:  154 PIGVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLKPAEQTPVSILFLMEIIGDL-IPAGVINVVNGFGSEAGNALATSQRIDKLAFTGSTEIGNHILKCAADNLIPSTIELGGKSPNIYFPDIFSHEDQYLDKCIEGALLAFFNQGEVCTCPSRILVHESIYEKFIAKIIERVALIKQGNPLDTETQIGAQVSKEQYDKILGYIQIGKDEGA 364          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL221_ARATH (Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 62/211 (29.38%), Postives = 101/211 (47.87%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDT-GISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642
            PLGV+ AI P+NYP +   + +  A+ +GN +V+K     + +          A    G P+ L+  +TG  +E G+ L    +V+ + F G    G  I + A   + P+ +ELGGKDA I+ EDAD+  VA   ++G    SGQ C   +   V + +  +           ++ GPP     D+  +  +  +  ++ LV DA  KGA
Sbjct:  188 PLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKMIFVGSTAVGKMIMRNAAETLTPVTLELGGKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVSAGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGA 395          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_PHOLL (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=astD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16
Identity = 55/153 (35.95%), Postives = 79/153 (51.63%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLV 480
            P GV+    P+N+P +L    I PALIAGN+LV KP     + A   V  +  AG P G+++ V G  S  G  L     ++ + FTG  +TG    +  G  P   L +E+GG +A IV    D+D     I++  F  +GQRCT  + +LV
Sbjct:  137 PHGVMAVFGPYNFPGHLPNGHIIPALIAGNTLVFKPSELTPMTAEETVKLWEKAGLPAGVLNLVQGARS-TGTALLEDKQIDGVLFTGSANTGFHFHRMLGGQPEKMLALEMGGNNALIVDAYDDIDAAVYTIVQSAFISAGQRCTCARRLLV 288          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL7A1_HUMAN (Alpha-aminoadipic semialdehyde dehydrogenase OS=Homo sapiens GN=ALDH7A1 PE=1 SV=4)

HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16
Identity = 69/243 (28.40%), Postives = 114/243 (46.91%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLK-PPTQG--AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPLQ------MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFC---QEYRREGNLIWPLLLDNVRPDMRI 723
            P+G+V  I  FN+PV +     A A+I GN  + K  PT    +VA   ++          G I  +T  G++IG  +     VN +SFTG      + K+ G++  +      +ELGG +A I  EDADL LV  + +      +GQRCT  + + + ES+ D +          + VG P + +    P+ ++ + +   G V +AK++G T     +   R GN + P ++  +  D  I
Sbjct:  156 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGST---QVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASI 395          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: UGA2_YEAST (Succinate-semialdehyde dehydrogenase [NADP+] OS=Saccharomyces cerevisiae GN=UGA2 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 69/234 (29.49%), Postives = 104/234 (44.44%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGS--EIGDFLTMHPAVNCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR----EGNLIWPLLLDNV 705
            P+GV   I P+N+P  +   K A AL  G ++V+KP +Q  ++AL M +    AGFPKG  + +    +  ++G  L   P V  ++FTG  + G  + K++   +  L  ELGG    IV EDADLD      +   F   GQ C     + V  S+ D              +G   +       V++ S+   +E    DA  KGA    E  R      N   P++L +V
Sbjct:  153 PVGVCGIICPWNFPSAMITRKAAAALAVGCTVVIKPDSQTPLSALAMAYLAEKAGFPKGSFNVILSHANTPKLGKTLCESPKVKKVTFTGSTNVGKILMKQSSSTLKKLSFELGGNAPFIVFEDADLDQALEQAMACKFRGLGQTCVCANRLYVHSSIIDKFAKLLAERVKKFVIGHGLDPKTTHGCVINSSAIEKVERHKQDAIDKGAKVVLEGGRLTELGPNFYAPVILSHV 386          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_SHEON (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella oneidensis GN=astD PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 57/177 (32.20%), Postives = 89/177 (50.28%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVME-SVADSLXXXXXXXXXXLTVGP 549
            P GVV    P+N+P +L    I PAL+AGNS+V KP       A  MV  +  +G P G+++ V G+  + G  L  HP ++ + FTG   TG  + ++    P   L +E+GG +  I+   AD+     +I++  +  SGQRCT  + + V +    D+L          + VGP
Sbjct:  134 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNSVVFKPSELTPKVAELMVTLWEKSGLPAGVLNLVQGE-VDTGKALASHPQLDGLFFTGSSRTGHLLHQQYAGHPGKILALEMGGNNPLIIKGVADIKAAVHDILQSAYISSGQRCTCARRLYVEQGEQGDALVAKLVEAVKQIKVGP 309          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_CHRSD (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=astD PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 56/178 (31.46%), Postives = 89/178 (50.00%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDT--GISISKKAGMIP--LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVME-SVADSLXXXXXXXXXXLTVGPP 552
            P GV+    P+N+P +L    I PAL+AGN++V KP  Q  + A   + C+  AG P G+I+ V G  +E+G  L     ++ + FTG     G+   +  G +   L +ELGG +  +V +  D +    +I++  F+  GQRCT  + ++V   +V D L          L V  P
Sbjct:  138 PHGVLAVYGPYNFPGHLPNGHIVPALLAGNAVVFKPSEQTPMTADLTLQCWLEAGLPAGVINLVQG-AAEVGQALAGSADIDGLLFTGSAKVGGLLHRQFGGQVDKILALELGGNNPLVVKDVPDREAAVLSILQSAFASGGQRCTCARRLIVPHGAVGDDLIDALTSAIAELRVAAP 314          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD2_PSEHT (N-succinylglutamate 5-semialdehyde dehydrogenase 2 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=astD2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMES 489
            P GVV    P+N+P +L    I PA++AGN++V KP       A   +  +  AG P G+I+ V G+  E G  L  H  ++ + FTG  +TG  + K+    P   L +E+GG +  I+ +  D+     +II+ GF  SGQRCT  + V +  S
Sbjct:  135 PHGVVAIFGPYNFPGHLPNGHIVPAILAGNTVVFKPSELTPHVAQFTLSLWLKAGLPAGVINLVQGE-IETGKALAAHQDIDGLFFTGSSNTGHLLHKQFAGHPGKILALEMGGNNPLIIKDVNDVSAAVHDIIQSGFITSGQRCTCARRVFIENS 289          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ALDH_PSEOL (Aldehyde dehydrogenase OS=Pseudomonas oleovorans GN=alkH PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 72/238 (30.25%), Postives = 104/238 (43.70%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAG---MIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVA---DSLXXXXXXXXXXLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQ--EYRREGNLIWPLLLDNVRPDMRI 723
            P GV L I P+NYP NL+   +  AL AGNS+V+KP       A  ++       F   L++ V G  +   + L +    + I FTG      +  +A    +  + +ELGGK   I+   A+L   A NI+ G FS +GQ C A   V V   +A   + +                  S D   +V++   N I  L+ DAK KGA   Q  +      L+ P +L NV   M I
Sbjct:  120 PKGVCLIIAPWNYPFNLSFGPLVSALAAGNSVVIKPSELTPHTAT-LIGSIVREAFSVDLVAVVEGDAAVSQELLAL--PFDHIFFTGSPRVGKLVMEAASKTLASVTLELGGKSPTIIGPTANLPKAARNIVWGKFSNNGQTCIAPDHVFVHRCIAQKFNEILVKEIVRVYGKDFAAQRRSADYCRIVNDQHFNRINKLLTDAKAKGAKILQGGQVDATERLVVPTVLSNVTAAMDI 354          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ASTD_LEGPH (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=astD PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16
Identity = 49/161 (30.43%), Postives = 87/161 (54.04%), Query Frame = 1
Query:   34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIP---LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSL 504
            P G+V+ +  FN+P +L+   I PAL+AGN+++ KP       A  ++ C+H +G P G+I+C+ G  +  G+ L +   +  + FTG   TG+ I ++    P   L +E+GG +  ++ E  D+D    + I      +GQRCT  + +++ +S    L
Sbjct:  144 PHGIVVVLGAFNFPAHLSNGHIVPALLAGNTVLYKPSEHTPAVAELIIQCWHDSGLPPGVINCLQG-NANCGNTL-LSQDIQGVYFTGSYATGLRIHQQFCNRPEVILALEMGGNNPLVIDEVKDIDAAVYHTILSTMITAGQRCTCARRIIIPDSQTGDL 302          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH_VIBC33.159e-1633.02Aldehyde dehydrogenase OS=Vibrio cholerae serotype... [more]
AL221_ARATH4.125e-1629.38Aldehyde dehydrogenase 22A1 OS=Arabidopsis thalian... [more]
ASTD_PHOLL5.388e-1635.95N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
AL7A1_HUMAN5.388e-1628.40Alpha-aminoadipic semialdehyde dehydrogenase OS=Ho... [more]
UGA2_YEAST7.037e-1629.49Succinate-semialdehyde dehydrogenase [NADP+] OS=Sa... [more]
ASTD_SHEON7.037e-1632.20N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_CHRSD7.037e-1631.46N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD2_PSEHT7.037e-1634.62N-succinylglutamate 5-semialdehyde dehydrogenase 2... [more]
ALDH_PSEOL7.037e-1630.25Aldehyde dehydrogenase OS=Pseudomonas oleovorans G... [more]
ASTD_LEGPH9.190e-1630.43N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
back to top