CX296731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 61/193 (31.61%), Postives = 78/193 (40.41%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+ G+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGEPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12 Identity = 60/193 (31.09%), Postives = 79/193 (40.93%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ Q++LMG +E R A + YPGG FDPL LA D E +KV E+K+ RLAM +M F+ +A Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEG--------------------YRVAGGPLGEVVDPLYPGGT-FDPLGLA---------DDPEAFADVKVKELKNGRLAMFSMFGFFVQA 231
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12 Identity = 61/193 (31.61%), Postives = 78/193 (40.41%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV IK+ RLAM +M F+ +A Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKHIKNGRLAMFSMFGFFVQA 233
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12 Identity = 60/193 (31.09%), Postives = 78/193 (40.41%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH WAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG F DPL LA D E LKV E+K+ RLAM +M F+ +A Sbjct: 10 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR--------------------IAGGPLGEVTDPIYPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQA 172
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12 Identity = 62/193 (32.12%), Postives = 80/193 (41.45%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+ W +AG+ +P + S ++ Q+LLMG VE R A + YPGG F DPL LA D E LKV E K+ RLAM +M F+ +A Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYR--------------------VAGGPLGVVVDPLYPGGSF-DPLGLA---------EDPEAFAELKVKETKNGRLAMFSMFGFFIQA 233
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12 Identity = 61/193 (31.61%), Postives = 81/193 (41.97%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF-------VGQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL P RE E+IH R AM+A +G +GQ + WF+AGA +P + S ++ T+++LMG VE R A + YPG FD L LA DTE LKV E+K+ RLAM +M F+ +A Sbjct: 73 LTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYR--------------------IARGPLGEVTDPLYPGS--FDSLGLA---------EDTEAFAELKVKELKNGRLAMFSMFGFFVQA 234
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12 Identity = 62/193 (32.12%), Postives = 82/193 (42.49%), Query Frame = 1 Query: 13 GSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS---GIP------WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 G PGDYG+D GL DP K YRE ELIH R + +G+ + + GI WF+AGA +P I + + L Q++LMG VE R P + ++ P G+ FDPL LA D + LKV EIK+ RLAM A L F+ +A Sbjct: 78 GEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNG--GPAGEGLDPLYP-------------------GEAFDPLGLA---------DDPDTFAELKVKEIKNGRLAMFACLGFFVQA 240
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12 Identity = 61/193 (31.61%), Postives = 78/193 (40.41%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D L DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 71 LTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------DDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12 Identity = 60/193 (31.09%), Postives = 79/193 (40.93%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DPA R+ E+IH RW M +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E L+V EIK+ RLAM +M F+ +A Sbjct: 70 LTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVIDPLYPGGS-FDPLGLA---------DDPEAFAELEVKEIKNGRLAMFSMFGFFVQA 232 The following BLAST results are available for this feature:
BLAST of CX296731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296731 ID=CX296731; Name=CX296731; organism=Citrus clementina; type=EST; length=689bpback to top |