CX296737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBL (Elongation factor Tu OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=tuf1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27 Identity = 77/207 (37.20%), Postives = 116/207 (56.04%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV GRVE GVL G Sbjct: 50 IDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBK (Elongation factor Tu OS=Clostridium botulinum (strain Okra / Type B1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27 Identity = 77/207 (37.20%), Postives = 116/207 (56.04%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV GRVE GVL G Sbjct: 50 IDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBH (Elongation factor Tu OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27 Identity = 77/207 (37.20%), Postives = 116/207 (56.04%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV GRVE GVL G Sbjct: 50 IDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_CLOB1 (Elongation factor Tu OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27 Identity = 77/207 (37.20%), Postives = 116/207 (56.04%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV GRVE GVL G Sbjct: 50 IDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_ANADE (Elongation factor Tu OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tuf1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27 Identity = 77/208 (37.02%), Postives = 111/208 (53.37%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK ERERGITI A +++T K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D K D + EV L + + ++P V + EGD L L++A+D I P+R +DKP +P++DV+ I G GTV GRVE G++K G Sbjct: 50 IDKAPEERERGITIATAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMVD---DKELLDLVELEVRELLSEYDFPGNEIPIVKGSALKALEGD-----KGELGEQAIFKLMEAVDAYIPTPQRATDKPFLMPVEDVFSISGRGTVATGRVERGIVKVG 242
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU1_STRRA (Elongation factor Tu-1 OS=Streptomyces ramocissimus GN=tuf1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27 Identity = 78/203 (38.42%), Postives = 112/203 (55.17%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + V+E+ S + G + V + EGD +S LD L+ A+D +I EP+R DKP +P++DV+ I G GTV GR+E GVLK Sbjct: 52 IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEIMELVELEVRELLSEYEFPGDDLPVVRVSALKALEGDAQWTQSV-LD------LMKAVDESIPEPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLK 240
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTM_ARATH (Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27 Identity = 75/206 (36.41%), Postives = 111/206 (53.88%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDN-MIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK E++RGITI A ++ET K + +D PGH D++KNMITG +Q D +L++ G QT+EH LLA +GV ++C NK+D + ++E+ S+ K G + + +S +G N I R L L+DA+D I +P R DKP +P++DV+ I G GTV GR+E GV+K G Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNDEIGRQAIL------KLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVG 297
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: CYSN_FRATN (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. novicida (strain U112) GN=cysN PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27 Identity = 79/217 (36.41%), Postives = 112/217 (51.61%), Query Frame = 3 Query: 6 AWVLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG-YNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 653 A ++D L +ERE+GITID+A F T K + D PGH + +NM TG S D A+++ID+ G QTR H+ + LG+K +I NKMD T YS+ Y I E YLK G + FVPIS +GDN++ +ST + W++G L+ L+ I +D+ R P+Q V + G V +G K G + PSG Sbjct: 76 ALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHSFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE---YLKLAGSLQIPDIRFVPISALDGDNVVSKSTKMPWFRGSPLMHYLETIKIDYAHTDE-FRFPVQLVCRPNSEFRGFQGTVVSGSAKIGDTIRVMPSG 279
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_STROR (Elongation factor Tu OS=Streptococcus oralis GN=tuf PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.686e-27 Identity = 75/206 (36.41%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E L++ +D I EP+R ++KPL LP++DV+ I G GTV GR++ G ++ Sbjct: 53 IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKIDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDII-------MELMNTVDEYIPEPERDTEKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_PELPB (Elongation factor Tu OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tuf PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.686e-27 Identity = 76/206 (36.89%), Postives = 111/206 (53.88%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P V + EGD E++ L+DA+D+ I +P R DKP +P++DV+ I G GTV GR+E G +K Sbjct: 50 IDKAPEERERGITISTAHVEYQTKKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPSLVVFLNKVDIADPEL----IELVELELRELLTQYNFPGDDIPIVKGSALKALEGDPEGEKAI-------MELMDAVDSFIPDPVRDIDKPFLMPVEDVFSISGRGTVGTGRIERGRIK 237 The following BLAST results are available for this feature:
BLAST of CX296737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296737 ID=CX296737; Name=CX296737; organism=Citrus clementina; type=EST; length=661bpback to top |