CX296737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_ACIBL (Elongation factor Tu OS=Acidobacteria bacterium (strain Ellin345) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.426e-27 Identity = 77/206 (37.38%), Postives = 108/206 (52.43%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +D ERERGITI A ++ET + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK DA D + EV L K G+ + +P V G + + W K L++A+D NI P R DKP +P++D++ I G GTV GR+E G +K G Sbjct: 51 IDNAPEERERGITIATAHVEYETANRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYVVVFLNKCDAVE---DAELIDLVEMEVRELLNKYGFPGDDLPVV-----RGSALGALNGEAQWEAKIDELMEAVDKNIPLPARDIDKPFLMPIEDIFSISGRGTVVTGRIERGKVKVG 241
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU1_STRCO (Elongation factor Tu-1 OS=Streptomyces coelicolor GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.426e-27 Identity = 78/207 (37.68%), Postives = 111/207 (53.62%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGP-TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + + VP V +S EGD +W L+ A+D I EP+R DKP +P++DV+ I G GTV GR+E GVLK Sbjct: 52 IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVD---DEEILELVELEVRELLSEYEFPGDDVPVVKVSALKALEGDK--------EWGNSVLELMKAVDEAIPEPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLK 240
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: CYSN_PSYIN (Sulfate adenylyltransferase subunit 1 OS=Psychromonas ingrahamii (strain 37) GN=cysN PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.426e-27 Identity = 74/205 (36.10%), Postives = 109/205 (53.17%), Query Frame = 3 Query: 12 VLDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETG 611 ++D L +ERE+GITID+A F T + + D PGH + +NM+TG S D A+++ID+ G QTR H+ + LG+K ++ NKMDA Y +A Y +I + + K++ N + FVPIS +GDN++ S N+ WY G LL L+ I +DK RL +Q V + G GTV G + G Sbjct: 78 LVDGLQSEREQGITIDVAYRYFATEQRKFIIADTPGHEQYTRNMVTGASTCDLAIILIDARYG-------VQVQTRRHSYICSLLGIKHLVVAVNKMDAV--DYDQAVYKKIKADYREFAKQL--NIADIRFVPISALKGDNVVNESENMTWYPGSPLLRLLNTIQIDTDINDK-FRLAVQYVNRPNLDFRGFCGTVASGEIRVG 270
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_YEAST (Elongation factor Tu, mitochondrial OS=Saccharomyces cerevisiae GN=TUF1 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27 Identity = 75/208 (36.06%), Postives = 111/208 (53.37%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK ER RGITI A ++ET K + + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV+ ++ NK+D + + E+ L + G++ + P + + EG R + LLDA+D I P+R +KP +P++D++ I G GTV GRVE G LK G Sbjct: 86 IDKAPEERARGITISTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGQMP-------QTREHLLLARQVGVQHIVVFVNKVDTID---DPEMLELVEMEMRELLNEYGFDGDNAPIIMGSALCALEG-----RQPEIGEQAIMKLLDAVDEYIPTPERDLNKPFLMPVEDIFSISGRGTVVTGRVERGNLKKG 278
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_THELT (Elongation factor Tu OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27 Identity = 78/206 (37.86%), Postives = 112/206 (54.37%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK E+ RGITI+I ++++ K + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V M+ NK+DA + D + EV L K + +++P + S + N YK L+DALD+ I EP R DKP + ++DV+ I G GTV GR+E G ++PG Sbjct: 50 IDKAPEEKARGITINITHVEYQSEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVNVPAMVVFLNKVDAVD---DQELVDLVEMEVRDLLTKYEFPGDEIPVIRGSALLA--LEANDPNDAAYKPIQELIDALDSYIPEPVREVDKPFLMAVEDVFSITGRGTVATGRIERGKIRPG 243
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_SYNPW (Elongation factor Tu OS=Synechococcus sp. (strain WH7803) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27 Identity = 73/206 (35.44%), Postives = 110/206 (53.40%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P V +SG + + E +D L+ A+D NI EP+R DKP + ++DV+ I G GTV GR+E G++K G Sbjct: 50 IDGAPEERERGITINTAHVEYETDTRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLSSYDFPGDDIPVVQVSGLKAIEGEAEWEAKID-----ELMQAVDANIPEPEREVDKPFLMAIEDVFSITGRGTVATGRIERGIVKVG 240
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_PLARO (Elongation factor Tu OS=Planobispora rosea GN=tuf PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27 Identity = 75/203 (36.95%), Postives = 110/203 (54.19%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +DK E+ RGITI IA +++T K + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + V+E+ S + G + V + EGD S L++A+D NI EP R +DKP +P++DV+ I G GTV GR+E GV+K Sbjct: 52 IDKAPEEKARGITISIAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSAQEFPGDDLPVVRVSALKALEGDEKWADSI-------IELMNAVDENIPEPPRDTDKPFLMPIEDVFSITGRGTVVTGRIERGVVK 240
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSS (Elongation factor Tu OS=Mycobacterium sp. (strain MCS) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27 Identity = 79/206 (38.35%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W K L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE GV+ Sbjct: 52 IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVV 238
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSK (Elongation factor Tu OS=Mycobacterium sp. (strain KMS) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27 Identity = 79/206 (38.35%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W K L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE GV+ Sbjct: 52 IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVV 238
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSJ (Elongation factor Tu OS=Mycobacterium sp. (strain JLS) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27 Identity = 79/206 (38.35%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W K L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE GV+ Sbjct: 52 IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVV 238 The following BLAST results are available for this feature:
BLAST of CX296737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296737 ID=CX296737; Name=CX296737; organism=Citrus clementina; type=EST; length=661bpback to top |