CX296737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_MYCLE (Elongation factor Tu OS=Mycobacterium leprae GN=tuf PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.267e-26 Identity = 80/206 (38.83%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPT-LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W + T L+DA+D +I P R +DKP +P++DV+ I G GTV GRVE GV+ Sbjct: 52 IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGD--------AKWVESVTQLMDAVDESIPAPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVV 238
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_MYCLB (Elongation factor Tu OS=Mycobacterium leprae (strain Br4923) GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.267e-26 Identity = 80/206 (38.83%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPT-LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W + T L+DA+D +I P R +DKP +P++DV+ I G GTV GRVE GV+ Sbjct: 52 IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGD--------AKWVESVTQLMDAVDESIPAPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVV 238
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_DESVV (Elongation factor Tu OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.267e-26 Identity = 80/206 (38.83%), Postives = 110/206 (53.40%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + + EV L G+ + VP V S + + N D K LL A D+ I EP+R DKP +P++DV+ I G GTV GRVE GV+K G Sbjct: 50 IDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYIVVFLNKCDMVD---DEELLELVELEVRELLTSYGFPGDDVPVVRGSALKA--LESDDPNSDACKPIRELLAACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVG 243
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_DESVH (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.267e-26 Identity = 80/206 (38.83%), Postives = 110/206 (53.40%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + + EV L G+ + VP V S + + N D K LL A D+ I EP+R DKP +P++DV+ I G GTV GRVE GV+K G Sbjct: 50 IDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYIVVFLNKCDMVD---DEELLELVELEVRELLTSYGFPGDDVPVVRGSALKA--LESDDPNSDACKPIRELLAACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVG 243
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_CHLL2 (Elongation factor Tu OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.267e-26 Identity = 75/206 (36.41%), Postives = 110/206 (53.40%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P + + +GD E++ L+DA+D I EP R DKP +P++DV+ I G GTV GR+E G +K Sbjct: 50 IDKAPEERERGITISTAHVEYQTKKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPEL----LELVELELRELLTEYNFPGDDIPIIKGSALKALDGDPEGEKAI-------MELMDAVDEFIPEPVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGRIK 237
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPU (Elongation factor Tu OS=Mycoplasma pulmonis GN=tuf PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 73/205 (35.61%), Postives = 111/205 (54.15%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +D E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D +L++ +T G QTREH LL+ +GV +M+ NK+D + E+ E+ S L + G++ +K P + + EG+ E++ L+DA+DN I P + DKP L ++DV+ I G GTV G+VE G L Sbjct: 50 IDAAPEEKARGITINTAHIEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMP-------QTREHILLSKQVGVPKMVVFLNKVDMLEGEDEMIELVEL--EIRSLLSEYGFDGDKTPIIKGSALKALEGNPQYEKNIE-------ELMDAVDNYIETPVKELDKPFLLAVEDVFTITGRGTVATGKVERGQL 238
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_LEUCK (Elongation factor Tu OS=Leuconostoc citreum (strain KM20) GN=tuf PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 77/212 (36.32%), Postives = 114/212 (53.77%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD----NMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +D E+ERGITI+ + ++ET + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D + + + EV L + + + +P + + EGD +IE L+D +D+ I EPKR +DKP +P++DV+ I G GTV GRV+ GVL G Sbjct: 50 IDNAPEEKERGITINTSHIEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYLVVFLNKTDLVD---DEELVELVEMEVRELLSEYDFPGDDIPVIKGSALKALEGDPEQVKVIEE-----------LMDTVDSYIPEPKRETDKPFLMPVEDVFTITGRGTVASGRVDRGVLTTG 240
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBL (Elongation factor Tu OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=tuf1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 73/206 (35.44%), Postives = 106/206 (51.46%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +D E+ RGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV +I NK D + + +V L K + + P V + EGD + + L++ALD + PKR +DKP +P++DV+ I G GTV GRVE GVLK Sbjct: 52 IDNAPEEKARGITIATSHQEYETNNRHYAHVDCPGHADYVKNMITGAAQMDAAILVVSATDGPMP-------QTKEHILLARQVGVPYVIVFINKADMLAADERAEMIEMVEMDVRDLLNKYNFPGDTTPIVYGSAVKALEGD-----ESEIGAPAILKLMEALDTFVPNPKRVTDKPFLMPVEDVFSITGRGTVATGRVEQGVLK 245
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBJ (Elongation factor Tu OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=tuf PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 73/206 (35.44%), Postives = 106/206 (51.46%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +D E+ RGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV +I NK D + + +V L K + + P V + EGD + + L++ALD + PKR +DKP +P++DV+ I G GTV GRVE GVLK Sbjct: 52 IDNAPEEKARGITIATSHQEYETNNRHYAHVDCPGHADYVKNMITGAAQMDAAILVVSATDGPMP-------QTKEHILLARQVGVPYVIVFINKADMLAADERAEMIEMVEMDVRDLLNKYNFPGDTTPIVYGSAVKALEGD-----ESEIGAPAILKLMEALDTFVPNPKRVTDKPFLMPVEDVFSITGRGTVATGRVEQGVLK 245
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_CHLCH (Elongation factor Tu OS=Chlorobium chlorochromatii (strain CaD3) GN=tuf PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 75/206 (36.41%), Postives = 111/206 (53.88%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P + + EGD E++ L+DA+D I +P R DKP +P++DV+ I G GTV GR+E G +K Sbjct: 50 IDKAPEERERGITISTAHVEYQTDKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVNVPSLVVFLNKVDIADPEL----IELVELELRELLSQYDFPGDDIPIIKGSALKAMEGDAEGEKAI-------LELMDAVDAFIPDPVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGRIK 237 The following BLAST results are available for this feature:
BLAST of CX296737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296737 ID=CX296737; Name=CX296737; organism=Citrus clementina; type=EST; length=661bpback to top |