CX296737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_BRASO (Elongation factor Tu OS=Bradyrhizobium sp. (strain ORS278) GN=tuf PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 72/208 (34.62%), Postives = 108/208 (51.92%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK E+ RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L K + +K+P + S ++ D +L+ + N++E P+RP D+P +P++DV+ I G GTV GRVE GV+K G Sbjct: 50 IDKAPEEKARGITISTAHVEYETQNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPALVVFLNKCDMVD---DPELLELVELEVRELLSKYEFPGDKIPIIKGSALAALEDSDKKLGHD-----AILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGRVERGVIKVG 242
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_BRASB (Elongation factor Tu OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tuf PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 72/208 (34.62%), Postives = 108/208 (51.92%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 626 +DK E+ RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L K + +K+P + S ++ D +L+ + N++E P+RP D+P +P++DV+ I G GTV GRVE GV+K G Sbjct: 50 IDKAPEEKARGITISTAHVEYETQNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPALVVFLNKCDMVD---DPELLELVELEVRELLSKYEFPGDKIPIIKGSALAALEDSDKKLGHD-----AILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGRVERGVIKVG 242
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_BORAP (Elongation factor Tu OS=Borrelia afzelii (strain PKo) GN=tuf PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 74/208 (35.58%), Postives = 114/208 (54.81%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 635 +D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G++ P + S F + E K LL+++DN + P+R DKP L ++DV+ I G GTV GR+E GV+K G V Sbjct: 51 IDNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGFS-ANTPIIKGSAFGAMSNPEDPEATKCVK--ELLESMDNYFDLPERDIDKPFLLAVEDVFSISGRGTVATGRIERGVIKVGQEV 244
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_STRU0 (Elongation factor Tu OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 74/205 (36.10%), Postives = 111/205 (54.15%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +D ERERGITI+ A ++ET + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E + A + I EP+R +DKPL LP++DV+ I G GTV GR++ G ++ Sbjct: 53 IDAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKIDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDIIM------ELMKTADEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_SALAI (Elongation factor Tu OS=Salinispora arenicola (strain CNS-205) GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 77/208 (37.02%), Postives = 112/208 (53.85%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWY-KGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKP 623 +DK E+ RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L Y + +P V +S EGD +W K L+ A+D +I +P+R ++KP +P++DV+ I G GTV GR E G+LKP Sbjct: 52 IDKAPEEKARGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYIVVALNKSDMVD---DEELLELVELEVRELLSSQEYPGDDLPVVRVSALKALEGDP--------EWAGKLMELMTAVDTSIPQPERETEKPFLMPIEDVFTITGRGTVVTGRAERGILKP 241
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_RICBR (Elongation factor Tu OS=Rickettsia bellii (strain RML369-C) GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 73/211 (34.60%), Postives = 113/211 (53.55%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 635 +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + + EG E++ + L+DA+D+ I +P R ++KP +P++DV+ I G GTV GR+E G +K G V Sbjct: 51 IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPIIRGSALQALEGKPEGEKAIH-------ELMDAVDSYIPQPIRETEKPFLMPIEDVFSISGRGTVVTGRIEAGKVKVGEAV 244
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_RICB8 (Elongation factor Tu OS=Rickettsia bellii (strain OSU 85-389) GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 73/211 (34.60%), Postives = 113/211 (53.55%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 635 +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + + EG E++ + L+DA+D+ I +P R ++KP +P++DV+ I G GTV GR+E G +K G V Sbjct: 51 IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPIIRGSALQALEGKPEGEKAIH-------ELMDAVDSYIPQPIRETEKPFLMPIEDVFSISGRGTVVTGRIEAGKVKVGEAV 244
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_MYCVP (Elongation factor Tu OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 77/206 (37.38%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ E+ P V +S EGD W K L++A+D +I +P R +DKP +P++DV+ I G GTV GRVE G++ Sbjct: 52 IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEELIELVEMEVRELLAAQDFD-EEAPVVKVSALKALEGDE--------KWVKSVEELMEAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGII 238
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_MYCA9 (Elongation factor Tu OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 76/203 (37.44%), Postives = 111/203 (54.68%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 617 +D E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + V+E+ S G N V + EGD +W K L+DA+D +I +P R ++KP +P++DV+ I G GTV GRVE GV+ Sbjct: 52 IDNAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDMVDDEELLELVEMEVRELLSSQDFDGDNAPVVRVSALKALEGD--------AEWGKTVADLMDAVDESIPDPVRETEKPFLMPVEDVFTITGRGTVVTGRVERGVI 239
BLAST of CX296737 vs. ExPASy Swiss-Prot
Match: EFTU_LEPIN (Elongation factor Tu OS=Leptospira interrogans GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 73/206 (35.44%), Postives = 105/206 (50.97%), Query Frame = 3 Query: 15 LDKLTAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 620 +D E+ RGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV +I NK D + + +V L K + + P V + EGD + + L++ALD + PKR DKP +P++DV+ I G GTV GRVE GVLK Sbjct: 52 IDNAPEEKARGITIATSHQEYETANRHYAHVDCPGHADYVKNMITGAAQMDAAILVVSATDGPMP-------QTKEHILLARQVGVPYVIVFINKADMLAADERAEMIEMVEMDVRELLNKYSFPGDTTPIVHGSAVKALEGD-----ESEIGMPAILKLMEALDTFVPNPKRVIDKPFLMPVEDVFSITGRGTVATGRVEQGVLK 245 The following BLAST results are available for this feature:
BLAST of CX296737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296737 ID=CX296737; Name=CX296737; organism=Citrus clementina; type=EST; length=661bpback to top |